RNAquarium Metadata Server
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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA609258" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA609258 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4414018 4414018 PRJNA609258_P_NODE_14464_length_508_cov_1.793103_g14082_i0 PRJNA609258 14464 508 1.793103 9.10896324 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 224 9.949999999999999e-54   NTclustered gi|1673119459|ref|XM_029365174.1| 94643 g14082 i0 78.592 3.30905511811024 341 71 67 2 101 440 1 340 Besnoitia besnoiti putative translation initiation factor SUI1 (BESB_067810), partial mRNA blastn 1681 224 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
6250950 6250950 PRJNA609258_P_NODE_23385_length_391_cov_1.059748_g23001_i0 PRJNA609258 23385 391 1.059748 4.14361468 Goussia 169155 SAR_Eukaryotes SAR_Eukaryotes 549 1.0899999999999994e-151   NTclustered gi|328460765|gb|GU479640.1| 947543 g23001 i0 99.016 78.227621483376 305 3 78 0 1 305 840 536 Goussia carpelli isolate CYP139-#139 18S ribosomal RNA gene, partial sequence blastn 30587 553 0.992766726943942 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Goussia Goussia carpelli
14616410 14616410 PRJNA609258_P_NODE_4192_length_948_cov_1.945143_g3917_i0 PRJNA609258 4192 948 1.945143 18.43995564 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 647 0   NTclustered gi|916414235|ref|XM_013372895.1| 5802 g3917 i0 83.748 71.5559071729958 683 111 72 0 266 948 1310 628 Eimeria tenella tubulin beta chain (ETH_00002520), partial mRNA blastn 67835 647 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
15889241 15889241 PRJNA609258_P_NODE_10273_length_610_cov_2.903166_g9898_i0 PRJNA609258 10273 610 2.903166 17.7093126 Cryptosporidium parvum 5807 SAR_Eukaryotes SAR_Eukaryotes 272 4.259999999999999e-68   NTclustered gi|126649276|ref|XM_001388273.1| 353152 g9898 i0 80.27 6.35737704918033 370 66 60 5 146 511 478 112 Cryptosporidium parvum Iowa II ribosomal protein S23 (cgd6_1390) mRNA, partial cds blastn 3878 272 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
16449898 16449898 PRJNA609258_P_NODE_1253_length_1498_cov_8.545263_g1144_i0 PRJNA609258 1253 1498 8.545263 128.00803974 Toxoplasma 5810 SAR_Eukaryotes SAR_Eukaryotes 881 0   NTclustered gi|260323703|dbj|AK317816.1| 5811 g1144 i0 78.702 48.9606141522029 1371 257 90 27 116 1470 231 1582 Toxoplasma gondii cDNA, clone: XTG00910.2, full cDNA, XTG Sugano cDNA library blastn 73343 881 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
17164232 17164232 PRJNA609258_P_NODE_1414_length_1440_cov_1.814923_g1288_i0 PRJNA609258 1414 1440 1.814923 26.1348912 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 1003 0   NTclustered gi|820690367|tpe|LN714481.1| 572307 g1288 i0 81.894 55.0652777777778 1204 204 83 14 1 1197 897570 898766 TPA_asm: Neospora caninum Liverpool, chromosome chrVIIa, complete genome blastn 79294 1003 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
17165648 17165648 PRJNA609258_P_NODE_53294_length_249_cov_0.886364_g52909_i0 PRJNA609258 53294 249 0.886364 2.20704636 Plasmodium yoelii 5861 SAR_Eukaryotes SAR_Eukaryotes 167 7.709999999999999e-37   NTclustered gi|1270524667|ref|XM_725753.2| 5861 g52909 i0 81.463 48.2489959839357 205 36 82 2 9 212 1027 1230 Plasmodium yoelii uncharacterized protein (PY17X_1464400), partial mRNA blastn 12014 167 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii
19714351 19714351 PRJNA609258_P_NODE_52616_length_250_cov_0.881356_g52231_i0 PRJNA609258 52616 250 0.881356 2.20339 Ascogregarina taiwanensis 158379 SAR_Eukaryotes SAR_Eukaryotes 206 1.6399999999999998e-48   NTclustered gi|157366229|gb|EF666482.1| 158379 g52231 i0 82.258 19.408 248 35 99 8 1 248 5780 5542 Ascogregarina taiwanensis 18S ribosomal RNA gene, partial sequence; and internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 26S ribosomal RNA and 5S ribosomal RNA genes, complete sequence blastn 4852 206 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Lecudinidae Ascogregarina Ascogregarina taiwanensis
20989082 20989082 PRJNA609258_P_NODE_21517_length_409_cov_2.092262_g21133_i0 PRJNA609258 21517 409 2.092262 8.55735158 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 313 1.63e-80   NTclustered gi|916427472|ref|XM_013379513.1| 5802 g21133 i0 89.754 62.2640586797066 244 25 60 0 166 409 1493 1250 Eimeria tenella uncharacterized protein (ETH_00000210), partial mRNA blastn 25466 313 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
22265178 22265178 PRJNA609258_P_NODE_60158_length_242_cov_0.923077_g59773_i0 PRJNA609258 60158 242 0.923077 2.23384634 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 248 2.59e-61   NTclustered gi|1673117913|ref|XM_029364357.1| 94643 g59773 i0 85.356 22.5537190082645 239 35 99 0 3 241 307 545 Besnoitia besnoiti histone deacetylase HDAC3 (BESB_059430), partial mRNA blastn 5458 248 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
24813751 24813751 PRJNA609258_P_NODE_43600_length_275_cov_1.544554_g43215_i0 PRJNA609258 43600 275 1.544554 4.2475235 Plasmodium yoelii 5861 SAR_Eukaryotes SAR_Eukaryotes 176 1.44e-39   NTclustered gi|82704923|ref|XM_721661.1| 5861 g43215 i0 78.261 46.6472727272727 276 58 100 2 1 275 1325 1051 Plasmodium yoelii heat shock protein 70, putative (PY17X_0712100), partial mRNA blastn 12828 176 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;