RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA608894" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA608894 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2422404 2422404 PRJNA608894_P_NODE_62082_length_223_cov_5.726667_g61583_i0 PRJNA608894 62082 223 5.726667 12.77046741 Polycladida 6163 Platyhelminthes Platyhelminthes 95.3 3.24e-15   NTclustered gi|2064684137|dbj|LC635089.1| 1784806 g61583 i0 82.456 51.067264573991 114 14 49 3 57 166 158 269 Prosthiostomum grande ICHUM:6032 gene for 28S rRNA, partial sequence blastn 11388 95.3 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Polycladida Prosthiostomidae Prosthiostomum Prosthiostomum grande
14614093 14614093 PRJNA608894_P_NODE_20392_length_449_cov_45.430851_g19896_i0 PRJNA608894 20392 449 45.430851 203.98452099 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 756 0   NTclustered gi|68479954|gb|DQ076149.1| 6182 g19896 i0 97.722 0.977728285077951 439 10 98 0 8 446 12 450 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 439 756 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;