RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA608894" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA608894 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5688842 5688842 PRJNA608894_P_NODE_20545_length_447_cov_1.441176_g20049_i0 PRJNA608894 20545 447 1.441176 6.44205672 Haliotis rufescens 6454 Mollusca Mollusca 60.2 2.59e-4   NTclustered gi|2245718922|ref|XM_048388551.1| 6454 g20049 i0 87.273 2.13870246085011 55 4 12 1 313 367 473 422 PREDICTED: Haliotis rufescens aspartate and glycine-rich protein-like (LOC124126726), mRNA blastn 956 60.2 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens
6964256 6964256 PRJNA608894_P_NODE_9066_length_862_cov_1.500634_g8636_i0 PRJNA608894 9066 862 1.500634 12.93546508 Physella acuta 109671 Mollusca Mollusca 58.4 0.002   NTclustered gi|2572346335|ref|XM_059303824.1| 109671 g8636 i0 100 0.0359628770301624 31 0 4 0 114 144 1055 1025 PREDICTED: Physella acuta GTPase IMAP family member 7-like (LOC131943626), mRNA blastn 31 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta
8238790 8238790 PRJNA608894_P_NODE_50767_length_250_cov_1.423729_g50268_i0 PRJNA608894 50767 250 1.423729 3.5593225 Mercenaria mercenaria 6596 Mollusca Mollusca 52.8 0.023   NTclustered gi|2442027744|ref|XM_053530778.1| 6596 g50268 i0 100 0.112 28 0 11 0 194 221 237 210 PREDICTED: Mercenaria mercenaria uncharacterized LOC128550859 (LOC128550859), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria
14614391 14614391 PRJNA608894_P_NODE_35712_length_302_cov_1.340611_g35213_i0 PRJNA608894 35712 302 1.340611 4.04864522 Planorbarius corneus 240818 Mollusca Mollusca 279 1.18e-70   NTclustered gi|42821988|gb|AY465084.1| 240818 g35213 i0 84.321 94.9900662251656 287 43 95 2 4 289 125 410 Planorbarius corneus actin gene, exon 2 and partial cds blastn 28687 279 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Planorbarius Planorbarius corneus
19712063 19712063 PRJNA608894_P_NODE_39076_length_286_cov_3.746479_g38577_i0 PRJNA608894 39076 286 3.746479 10.71492994 Mytilus edulis 6550 Mollusca Mollusca 215 3.19e-51   NTclustered gi|2912438933|ref|XM_071270510.1| 6550 g38577 i0 87.179 60.534965034965 195 18 66 5 97 285 1605 1412 PREDICTED: Mytilus edulis tubulin beta-4B chain-like (LOC139485864), transcript variant X1, mRNA blastn 17313 215 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;