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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA608894" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA608894 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3135975 3135975 PRJNA608894_P_NODE_18783_length_479_cov_1.600985_g18287_i0 PRJNA608894 18783 479 1.600985 7.66871815 Thaumatomonas seravini 188939 SAR_Eukaryotes SAR_Eukaryotes 420 1.11e-112   NTclustered gi|160337323|gb|EF455755.1| 188939 g18287 i0 82.573 104.701461377871 482 78 100 6 1 479 211 689 Thaumatomonas seravini actin gene, partial cds blastn 50152 420 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Thaumatomonas Thaumatomonas seravini
3136592 3136592 PRJNA608894_P_NODE_51583_length_249_cov_2.062500_g51084_i0 PRJNA608894 51583 249 2.0625 5.135625 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 303 5.63e-78   NTclustered gi|300676723|gb|GQ377712.1| 323453 g51084 i0 88.71 1.20481927710843 248 28 99 0 2 249 621 374 Heteromita sp. PRA-74 elongation factor 2 (ef2) mRNA, partial cds blastn 300 303 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
5688696 5688696 PRJNA608894_P_NODE_11725_length_697_cov_3.913462_g11259_i0 PRJNA608894 11725 697 3.913462 27.27683014 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 675 0   NTclustered gi|238617602|gb|FJ973377.1| 188950 g11259 i0 96.145 26.1104734576758 415 13 59 3 284 697 249 661 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 18199 675 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
8238448 8238448 PRJNA608894_P_NODE_32687_length_317_cov_0.946721_g32188_i0 PRJNA608894 32687 317 0.946721 3.00110557 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 287 7.48e-73   NTclustered gi|301014702|gb|GQ377715.1| 323453 g32188 i0 87.402 70.8927444794953 254 27 79 5 1 251 240 491 Heteromita sp. PRA-74 ribosomal protein S23a (rps23a) mRNA, complete cds blastn 22473 287 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
12064436 12064436 PRJNA608894_P_NODE_17010_length_518_cov_1.453933_g16514_i0 PRJNA608894 17010 518 1.453933 7.53137294 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 889 0   NTclustered gi|300676732|gb|GQ377662.1| 188950 g16514 i0 97.679 89.2857142857143 517 12 99 0 1 517 298 814 Bodomorpha minima alpha-tubulin (Atub) gene, partial cds blastn 46250 889 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
13339550 13339550 PRJNA608894_P_NODE_37411_length_293_cov_2.313636_g36912_i0 PRJNA608894 37411 293 2.313636 6.77895348 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 536 6.149999999999998e-148   NTclustered gi|238617602|gb|FJ973377.1| 188950 g36912 i0 99.659 99.5767918088737 293 1 100 0 1 293 315 23 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 29176 536 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;