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contig_metadata

18 rows where analysis = "blastn", bioproject = "PRJNA608894" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 18 ✖

bioproject 1

  • PRJNA608894 · 18 ✖

analysis 1

  • blastn · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
585385 585385 PRJNA608894_P_NODE_36141_length_299_cov_4.172566_g35642_i0 PRJNA608894 36141 299 4.172566 12.47597234 Vannella sp. strain W181G/I 325084 Discosea other_Eukaryota 529 1.0499999999999996e-145   NTclustered gi|62865938|gb|AY929913.1| 325084 g35642 i0 98.667 77.4448160535117 300 1 100 3 1 299 1440 1143 Vannella sp. strain W181G/I 18S small subunit ribosomal RNA gene, partial sequence blastn 23156 529 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain W181G/I
3136107 3136107 PRJNA608894_P_NODE_25263_length_379_cov_3.088235_g24766_i0 PRJNA608894 25263 379 3.088235 11.70441065 Balamuthia mandrillaris 66527 Discosea other_Eukaryota 139 2.69e-28   NTclustered gi|2375625619|gb|OP941128.1| 66527 g24766 i0 77.637 61.3456464379947 237 48 62 5 112 346 955 722 Balamuthia mandrillaris isolate AND-2017/AMCV-19 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 23250 139 1 Eukaryota Amoebozoa   Discosea   Longamoebia Balamuthiidae Balamuthia Balamuthia mandrillaris
4412841 4412841 PRJNA608894_P_NODE_28104_length_351_cov_2.661871_g27605_i0 PRJNA608894 28104 351 2.661871 9.34316721 Arcyria sp. 5 3234316 Evosea other_Eukaryota 220 8.59e-53   NTclustered gi|2772191493|gb|PQ014924.1| 3234316 g27605 i0 79.141 68.8575498575499 326 62 92 6 29 351 842 520 Arcyria sp. 5 voucher sc32693 translation elongation factor 1-alpha (EF1a) gene, partial cds blastn 24169 220 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Trichiidae Arcyria Arcyria sp. 5
4413031 4413031 PRJNA608894_P_NODE_37424_length_293_cov_2.059091_g36925_i0 PRJNA608894 37424 293 2.059091 6.0331366299999996 uncultured Rhizamoeba 1260765 Tubulinea other_Eukaryota 366 8.54e-97   NTclustered gi|511487963|gb|JX898537.1| 1260765 g36925 i0 89.384 55.3139931740614 292 29 99 2 2 293 471 182 Uncultured Rhizamoeba clone HCA_D03-34 28S ribosomal RNA gene, partial sequence blastn 16207 366 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae   uncultured Rhizamoeba
6250758 6250758 PRJNA608894_P_NODE_27505_length_356_cov_4.176678_g27006_i0 PRJNA608894 27505 356 4.176678 14.86897368 Vannellidae 95227 Discosea other_Eukaryota 348 3.84e-91   NTclustered gi|399764216|gb|JQ271727.1| 1215631 g27006 i0 88.119 84.3511235955056 303 23 84 8 59 356 268 562 Vannella sp. BEN3V 18S ribosomal RNA gene, partial sequence blastn 30029 348 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. BEN3V
6963228 6963228 PRJNA608894_P_NODE_10086_length_789_cov_7.148045_g9634_i0 PRJNA608894 10086 789 7.148045 56.39807505 Paravannella minima 1443144 Discosea other_Eukaryota 100 2.79e-16   NTclustered gi|1583105587|ref|NC_040955.1| 1443144 g9634 i0 91.667 10.4233206590621 72 6 9 0 58 129 2853 2782 Paravannella minima mitochondrion, complete genome blastn 8224 100 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
12064927 12064927 PRJNA608894_P_NODE_41670_length_277_cov_1.960784_g41171_i0 PRJNA608894 41670 277 1.960784 5.43137168 Cochliopodium sp. strain Kiel 313998 Discosea other_Eukaryota 302 2.29e-77   NTclustered gi|59876024|gb|AY785057.1| 313998 g41171 i0 86.926 23.086642599278 283 20 100 15 1 277 93 364 Cochliopodium sp. strain Kiel 18S ribosomal RNA gene, partial sequence blastn 6395 302 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium sp. strain Kiel
12065140 12065140 PRJNA608894_P_NODE_53070_length_248_cov_0.880000_g52571_i0 PRJNA608894 53070 248 0.88 2.1824 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 398 2.5e-106   NTclustered gi|470377088|ref|XM_004333300.1| 1257118 g52571 i0 95.565 1 248 11 100 0 1 248 991 1238 Acanthamoeba castellanii str. Neff protein kinase domain containing protein (ACA1_190620), partial mRNA blastn 248 398 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13339486 13339486 PRJNA608894_P_NODE_34271_length_309_cov_3.042373_g33772_i0 PRJNA608894 34271 309 3.042373 9.40093257 Artodiscus saltans 2598528 Evosea other_Eukaryota 165 3.55e-36   NTclustered gi|1708283174|gb|MH729177.1| 2598528 g33772 i0 86.986 64.9061488673139 146 19 47 0 1 146 464 319 Artodiscus saltans clone 3 18S ribosomal RNA gene, partial sequence blastn 20056 165 1 Eukaryota Amoebozoa   Evosea Variosea     Artodiscus Artodiscus saltans
14614043 14614043 PRJNA608894_P_NODE_18392_length_486_cov_36.912833_g17896_i0 PRJNA608894 18392 486 36.912833 179.39636838 Paramoeba perurans 437603 Discosea other_Eukaryota 281 5.55e-71   NTclustered gi|145386786|gb|EF216911.1| 437603 g17896 i0 78.959 28.5679012345679 442 71 88 16 20 446 1 435 Neoparamoeba perurans strain GD-HAC/2/2 28S large subunit ribosomal RNA gene, partial sequence blastn 13884 281 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba perurans
15888025 15888025 PRJNA608894_P_NODE_20133_length_454_cov_2.913386_g19637_i0 PRJNA608894 20133 454 2.913386 13.22677244 uncultured Amoebozoa 590481 Root_unresolved Root_unresolved 420 1.0499999999999998e-112   NTclustered gi|221185864|gb|FJ577811.1| 590481 g19637 i0 94.265 44.4603524229075 279 9 75 6 174 446 994 717 Uncultured Amoebozoa clone Ivry07 18S ribosomal RNA gene, partial sequence blastn 20185 420 1 Eukaryota Amoebozoa             uncultured Amoebozoa
15888930 15888930 PRJNA608894_P_NODE_9553_length_824_cov_3.026631_g9108_i0 PRJNA608894 9553 824 3.026631 24.93943944 Paravannella minima 1443144 Discosea other_Eukaryota 259 4.5500000000000005e-64   NTclustered gi|1583105587|ref|NC_040955.1| 1443144 g9108 i0 73.495 17.1359223300971 864 155 100 61 1 824 3825 2996 Paravannella minima mitochondrion, complete genome blastn 14120 259 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
16449842 16449842 PRJNA608894_P_NODE_56053_length_245_cov_0.895349_g55554_i0 PRJNA608894 56053 245 0.895349 2.19360505 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 126 1.28e-24   NTclustered gi|260909292|gb|FJ766478.1| 435420 g55554 i0 96.104 31.6040816326531 77 3 31 0 1 77 1297 1373 Schizoplasmodiopsis amoeboidea strain BG7A-12B piece G 18S ribosomal RNA gene, partial sequence blastn 7743 126 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida   Schizoplasmodiopsis Schizoplasmodiopsis amoeboidea
20987433 20987433 PRJNA608894_P_NODE_17477_length_507_cov_1.949309_g16981_i0 PRJNA608894 17477 507 1.949309 9.88299663 Vannella sp. strain CAZ6/I 325077 Discosea other_Eukaryota 337 1.22e-87   NTclustered gi|62865939|gb|AY929914.1| 325077 g16981 i0 79.417 97.7633136094675 515 76 100 20 1 507 1649 1157 Vannella sp. strain CAZ6/I 18S small subunit ribosomal RNA gene, partial sequence blastn 49566 337 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain CAZ6/I
20988184 20988184 PRJNA608894_P_NODE_58977_length_242_cov_0.911243_g58478_i0 PRJNA608894 58977 242 0.911243 2.20520806 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 425 1.11e-114   NTclustered gi|470373728|ref|XM_004332993.1| 1257118 g58478 i0 98.347 1.16528925619835 242 4 100 0 1 242 1068 827 Acanthamoeba castellanii str. Neff hydroxymethylglutarylCoA synthase (ACA1_048170), partial mRNA blastn 282 425 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22262332 22262332 PRJNA608894_P_NODE_23878_length_396_cov_3.962848_g23381_i0 PRJNA608894 23878 396 3.962848 15.69287808 Ripella sp. 805 1217113 Discosea other_Eukaryota 512 1.45e-140   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g23381 i0 90.863 100.20202020202 394 18 99 6 4 396 971 595 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 39680 512 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
24811630 24811630 PRJNA608894_P_NODE_31380_length_325_cov_2.000000_g30881_i0 PRJNA608894 31380 325 2 6.5 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 233 1.02e-56   NTclustered gi|470442906|ref|XM_004339540.1| 1257118 g30881 i0 85.845 28.2184615384615 219 31 67 0 103 321 21 239 Acanthamoeba castellanii str. Neff 60S ribosomal protein, putative (ACA1_063390), partial mRNA blastn 9171 233 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24811761 24811761 PRJNA608894_P_NODE_38520_length_288_cov_4.493023_g38021_i0 PRJNA608894 38520 288 4.493023 12.93990624 Vannella sp. strain W181G/I 325084 Discosea other_Eukaryota 455 1.7400000000000003e-123   NTclustered gi|62865938|gb|AY929913.1| 325084 g38021 i0 95.189 101.836805555556 291 9 100 4 1 288 11 299 Vannella sp. strain W181G/I 18S small subunit ribosomal RNA gene, partial sequence blastn 29329 455 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain W181G/I

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;