RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA608660" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA608660 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3135347 3135347 PRJNA608660_P_NODE_11423_length_440_cov_11.920716_g11076_i0 PRJNA608660 11423 440 11.920716 52.4511504 Alphaendornavirus fuphaseoli 3426176 Viruses Viruses 403 1.0199999999999994e-107   NTclustered gi|1243012349|gb|MF281671.1| 1188793 g11076 i0 100 12.6863636363636 218 0 100 0 1 218 2495 2278 Phaseolus vulgaris alphaendornavirus 2 isolate SRF2 polyprotein gene, complete cds blastn 5582 403 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Alphaendornavirus fuphaseoli
4412407 4412407 PRJNA608660_P_NODE_40864_length_185_cov_1.500000_g40507_i0 PRJNA608660 40864 185 1.5 2.775 Tobamovirus fortpiercense 3432870 Viruses Viruses 228 2.4499999999999995e-55   NTclustered gi|1341138404|gb|KY769775.1| 233051 g40507 i0 94 19.4594594594595 150 9 81 0 1 150 6209 6060 Hibiscus latent Fort Pierce virus isolate Hib2, complete genome blastn 3600 228 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus fortpiercense
6962950 6962950 PRJNA608660_P_NODE_27526_length_251_cov_1.544554_g27170_i0 PRJNA608660 27526 251 1.544554 3.87683054 Alphaendornavirus capsici 3426171 Viruses Viruses 348 2.5900000000000005e-91   NTclustered gi|2558625253|gb|OQ863603.1| 354328 g27170 i0 99.476 31.1434262948207 191 1 100 0 1 191 1995 2185 Bell pepper alphaendornavirus isolate BHJ1/22, complete genome blastn 7817 348 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Alphaendornavirus capsici
17162574 17162574 PRJNA608660_P_NODE_4814_length_658_cov_16.986864_g4520_i0 PRJNA608660 4814 658 16.986864 111.77356512 Tobamovirus tabaci 3432891 Viruses Viruses 664 0   NTclustered gi|2217162015|gb|OL584366.1| 12242 g4520 i0 99.452 98.7765957446808 365 2 97 0 12 376 4908 4544 Tobacco mosaic virus isolate DSMZ PV-1199 genomic sequence blastn 64995 664 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
20986978 20986978 PRJNA608660_P_NODE_24517_length_273_cov_2.705357_g24161_i0 PRJNA608660 24517 273 2.705357 7.38562461 Alphaendornavirus fuphaseoli 3426176 Viruses Viruses 409 1.29e-109   NTclustered gi|1243012349|gb|MF281671.1| 1188793 g24161 i0 98.696 12.2014652014652 230 3 84 0 39 268 5479 5250 Phaseolus vulgaris alphaendornavirus 2 isolate SRF2 polyprotein gene, complete cds blastn 3331 409 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Alphaendornavirus fuphaseoli
20987296 20987296 PRJNA608660_P_NODE_8757_length_504_cov_33.061538_g8419_i0 PRJNA608660 8757 504 33.061538 166.63015152 Alphaendornavirus fuphaseoli 3426176 Viruses Viruses 571 3.0599999999999993e-158   NTclustered gi|1243012349|gb|MF281671.1| 1188793 g8419 i0 100 12.2539682539683 309 0 93 0 179 487 9795 10103 Phaseolus vulgaris alphaendornavirus 2 isolate SRF2 polyprotein gene, complete cds blastn 6176 571 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Alphaendornavirus fuphaseoli
21548813 21548813 PRJNA608660_P_NODE_2757_length_815_cov_4.639687_g2530_i0 PRJNA608660 2757 815 4.639687 37.81344905 Tobamovirus 12234 Viruses Viruses 1474 0   NTclustered gi|2201440261|gb|OL652662.1| 12253 g2530 i0 99.751 98.6539877300613 804 2 99 0 1 804 5190 5993 Tomato mosaic virus isolate NVWA36783860, complete genome blastn 80403 1474 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tomatotessellati
24811006 24811006 PRJNA608660_P_NODE_30140_length_235_cov_1.397849_g29784_i0 PRJNA608660 30140 235 1.397849 3.28494515 Alphaendornavirus fuphaseoli 3426176 Viruses Viruses 414 2.33e-111   NTclustered gi|1243012349|gb|MF281671.1| 1188793 g29784 i0 100 12.3914893617021 224 0 95 0 12 235 7719 7496 Phaseolus vulgaris alphaendornavirus 2 isolate SRF2 polyprotein gene, complete cds blastn 2912 414 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Alphaendornavirus fuphaseoli

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;