RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA605033" and tax_kingdom = "Thermoproteati"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 3 ✖

bioproject 1

  • PRJNA605033 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5685980 5685980 PRJNA605033_P_NODE_210365_length_162_cov_1.259843_g208796_i0 PRJNA605033 210365 162 1.259843 2.04094566 Candidatus Nitrosotenuis aquarius 1846278 Archaea Archaea 291 2.62e-74   NTclustered gi|1279207014|gb|CP024808.1| 1846278 g208796 i0 99.375 74.9012345679012 160 1 99 0 1 160 293826 293667 Candidatus Nitrosotenuis aquarius strain AQ6F chromosome, complete genome blastn 12134 291 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis aquarius
6248501 6248501 PRJNA605033_P_NODE_143525_length_200_cov_2.896970_g141956_i0 PRJNA605033 143525 200 2.89697 5.79394 Thermoproteati 1783275 Archaea Archaea 364 1.96e-96   NTclustered gi|22797874|emb|AJ496176.1| 29281 g141956 i0 99.5 34.305 200 1 100 0 1 200 7350 7151 Uncultured crenarchaeote 34 kb genomic fragment blastn 6861 364 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
14611210 14611210 PRJNA605033_P_NODE_216112_length_160_cov_1.136000_g214543_i0 PRJNA605033 216112 160 1.136 1.8176 Candidatus Nitrosocosmicus hydrocola 1826872 Archaea Archaea 228 2.0499999999999995e-55   NTclustered gi|1100598057|gb|CP017922.1| 1826872 g214543 i0 92.073 49.65 164 9 100 2 1 160 1789672 1789509 Candidatus Nitrosocosmicus hydrocola strain G61, complete genome blastn 7944 228 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus hydrocola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;