RNAquarium Metadata Server
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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJNA605033" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 15 ✖

bioproject 1

  • PRJNA605033 · 15 ✖

analysis 1

  • blastn · 15 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2420377 2420377 PRJNA605033_P_NODE_182902_length_173_cov_3.275362_g181333_i0 PRJNA605033 182902 173 3.275362 5.66637626 root 1 Root_unresolved Root_unresolved 318 1.3e-82   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g181333 i0 100 99.4219653179191 172 0 99 0 1 172 26311 26140 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 17200 318 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
3696831 3696831 PRJNA605033_P_NODE_215723_length_160_cov_1.360000_g214154_i0 PRJNA605033 215723 160 1.36 2.176 root 1 Root_unresolved Root_unresolved 237 3.4100000000000004e-58   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g214154 i0 97.826 86.25 138 2 86 1 24 160 11417 11554 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 13800 237 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
3696977 3696977 PRJNA605033_P_NODE_238303_length_153_cov_0.923729_g236734_i0 PRJNA605033 238303 153 0.923729 1.41330537 root 1 Root_unresolved Root_unresolved 278 1.9e-70   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g236734 i0 99.346 100 153 1 100 0 1 153 29019 29171 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 15300 278 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
4973395 4973395 PRJNA605033_P_NODE_213904_length_160_cov_3.560000_g212335_i0 PRJNA605033 213904 160 3.56 5.696 root 1 Root_unresolved Root_unresolved 159 7.599999999999998e-35   NTclustered gi|182375520|dbj|AB433721.1| 10515 g212335 i0 100 99.21875 86 0 100 0 1 86 818 903 Human adenovirus 2 gene for hexon, partial cds, isolate: Ad2Y91-100 blastn 15875 159 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
6249436 6249436 PRJNA605033_P_NODE_50825_length_238_cov_2.546798_g49257_i0 PRJNA605033 50825 238 2.546798 6.06137924 root 1 Root_unresolved Root_unresolved 440 3.899999999999999e-119   NTclustered gi|2079660852|emb|OU501478.1| 10515 g49257 i0 100 100 238 0 100 0 1 238 23683 23446 Human adenovirus 2 isolate ADVJA-00-BE genome assembly, chromosome: ADVJA-00-BE blastn 23800 440 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
7523637 7523637 PRJNA605033_P_NODE_62886_length_223_cov_2.446809_g61317_i0 PRJNA605033 62886 223 2.446809 5.45638407 root 1 Root_unresolved Root_unresolved 359 1.04e-94   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g61317 i0 100 86.9955156950673 194 0 87 0 6 199 18400 18207 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 19400 359 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
8797578 8797578 PRJNA605033_P_NODE_13527_length_381_cov_2.297688_g11987_i0 PRJNA605033 13527 381 2.297688 8.75419128 root 1 Root_unresolved Root_unresolved 355 2.47e-93   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g11987 i0 100 81.3648293963255 192 0 81 0 1 192 25137 24946 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 31000 355 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
9509885 9509885 PRJNA605033_P_NODE_140328_length_204_cov_1.514793_g138759_i0 PRJNA605033 140328 204 1.514793 3.09017772 Mastadenovirus caesari 3241411 Viruses Viruses 355 1.21e-93   NTclustered gi|1967465804|gb|MT950711.1| 129951 g138759 i0 98.049 98.0637254901961 205 2 100 2 1 204 435 638 Human mastadenovirus C isolate HAdV C1 GZ20190527/650 penton base protein gene, partial cds blastn 20005 355 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
11348672 11348672 PRJNA605033_P_NODE_204369_length_164_cov_1.627907_g202800_i0 PRJNA605033 204369 164 1.627907 2.66976748 root 1 Root_unresolved Root_unresolved 303 3.42e-78   NTclustered gi|2079660852|emb|OU501478.1| 10515 g202800 i0 100 100 164 0 100 0 1 164 23922 23759 Human adenovirus 2 isolate ADVJA-00-BE genome assembly, chromosome: ADVJA-00-BE blastn 16400 303 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
12624484 12624484 PRJNA605033_P_NODE_241070_length_152_cov_1.341880_g239501_i0 PRJNA605033 241070 152 1.34188 2.0396576 root 1 Root_unresolved Root_unresolved 281 1.46e-71   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g239501 i0 100 100 152 0 100 0 1 152 28426 28275 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 15200 281 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
15173084 15173084 PRJNA605033_P_NODE_143612_length_200_cov_2.539394_g142043_i0 PRJNA605033 143612 200 2.539394 5.078788 root 1 Root_unresolved Root_unresolved 370 4.22e-98   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g142043 i0 100 100 200 0 100 0 1 200 22452 22651 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 20000 370 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
15173576 15173576 PRJNA605033_P_NODE_217172_length_159_cov_2.629032_g215603_i0 PRJNA605033 217172 159 2.629032 4.18016088 root 1 Root_unresolved Root_unresolved 294 1.98e-75   NTclustered gi|182375520|dbj|AB433721.1| 10515 g215603 i0 100 100 159 0 100 0 1 159 409 567 Human adenovirus 2 gene for hexon, partial cds, isolate: Ad2Y91-100 blastn 15900 294 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
21547232 21547232 PRJNA605033_P_NODE_220777_length_158_cov_1.943089_g219208_i0 PRJNA605033 220777 158 1.943089 3.07008062 root 1 Root_unresolved Root_unresolved 292 7.07e-75   NTclustered gi|2079660852|emb|OU501478.1| 10515 g219208 i0 100 100 158 0 100 0 1 158 12696 12539 Human adenovirus 2 isolate ADVJA-00-BE genome assembly, chromosome: ADVJA-00-BE blastn 15800 292 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
22823209 22823209 PRJNA605033_P_NODE_78018_length_222_cov_2.593583_g76449_i0 PRJNA605033 78018 222 2.593583 5.75775426 root 1 Root_unresolved Root_unresolved 141 4.09e-29   NTclustered gi|2815854107|gb|PQ393462.1| 10515 g76449 i0 100 67.6711711711712 76 0 68 0 147 222 212 137 Human adenovirus 2 isolate ADENO/TWN/HL2308a/2023 hexon gene, partial cds blastn 15023 141 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
24097505 24097505 PRJNA605033_P_NODE_39879_length_255_cov_3.277273_g38311_i0 PRJNA605033 39879 255 3.277273 8.35704615 root 1 Root_unresolved Root_unresolved 198 2.81e-46   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g38311 i0 100 71.0823529411765 107 0 71 0 1 107 18606 18712 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 18126 198 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;