RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA603943" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA603943 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5681297 5681297 PRJNA603943_P_NODE_51345_length_255_cov_1.241758_g51153_i0 PRJNA603943 51345 255 1.241758 3.1664829 Linderina pennispora 61395 Fungi Fungi 198 2.81e-46   NTclustered gi|2028313324|ref|XM_040886323.1| 61395 g51153 i0 82.479 34.0470588235294 234 33 90 7 1 230 1201 1430 Linderina pennispora putative proline--tRNA ligase C19C7.06 (DL89DRAFT_264615), mRNA blastn 8682 198 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
13331365 13331365 PRJNA603943_P_NODE_4391_length_712_cov_1.589984_g4213_i0 PRJNA603943 4391 712 1.589984 11.32068608 Linderina pennispora 61395 Fungi Fungi 89.8 5.43e-13   NTclustered gi|2028323728|ref|XM_040889815.1| 61395 g4213 i0 93.333 8.13904494382022 60 4 8 0 1 60 599 658 Linderina pennispora 60S ribosomal protein l10a (DL89DRAFT_285288), partial mRNA blastn 5795 89.8 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;