RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA603943" and tax_kingdom = "Thermotogati"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Thermotogati · 8 ✖

bioproject 1

  • PRJNA603943 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9506049 9506049 PRJNA603943_P_NODE_55488_length_250_cov_0.870056_g55296_i0 PRJNA603943 55488 250 0.870056 2.17514 Deinococcus ficus 317577 Bacteria Bacteria 287 5.7e-73   NTclustered gi|1220362168|gb|CP021081.1| 317577 g55296 i0 95.556 2.72 180 6 100 2 1 178 707243 707064 Deinococcus ficus strain CC-FR2-10, complete genome blastn 680 287 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus ficus
9506385 9506385 PRJNA603943_P_NODE_66808_length_243_cov_0.905882_g66616_i0 PRJNA603943 66808 243 0.905882 2.20129326 Deinococcus radiopugnans 57497 Bacteria Bacteria 231 2.6199999999999997e-56   NTclustered gi|730601855|gb|CP010028.1| 57497 g66616 i0 85.398 9.8765432098765409 226 29 92 4 1 224 57060 57283 Deinococcus swuensis strain DY59, complete genome blastn 2400 231 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus radiopugnans
10781797 10781797 PRJNA603943_P_NODE_50169_length_259_cov_0.940860_g49977_i0 PRJNA603943 50169 259 0.94086 2.4368274 Deinococcus sp. QL22 2939437 Bacteria Bacteria 448 2.5699999999999995e-121   NTclustered gi|2238957582|gb|CP097149.1| 2939437 g49977 i0 98.062 360.003861003861 258 3 99 2 3 259 1361361 1361617 Deinococcus sp. QL22 chromosome, complete genome blastn 93241 448 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. QL22
13331345 13331345 PRJNA603943_P_NODE_43251_length_281_cov_1.322115_g43059_i0 PRJNA603943 43251 281 1.322115 3.71514315 Thermus thermophilus 274 Bacteria Bacteria 444 3.66e-120   NTclustered gi|1955386990|dbj|AP024305.1| 274 g43059 i0 96.629 18.9466192170818 267 9 95 0 15 281 325236 325502 Thermus thermophilus HB5008 DNA, complete genome blastn 5324 444 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus thermophilus
13897211 13897211 PRJNA603943_P_NODE_61231_length_246_cov_0.890173_g61039_i0 PRJNA603943 61231 246 0.890173 2.18982558 root 1 Root_unresolved Root_unresolved 60.2 1.33e-4   NTclustered gi|2188906985|dbj|AP025585.1| 638849 g61039 i0 88 0.463414634146341 50 6 20 0 3 52 202589 202540 Pyramidobacter piscolens CE91-St28 DNA, complete genome blastn 114 60.2 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Dethiosulfovibrionaceae Pyramidobacter Pyramidobacter piscolens
17155851 17155851 PRJNA603943_P_NODE_70414_length_241_cov_0.916667_g70222_i0 PRJNA603943 70414 241 0.916667 2.20916747 Thermus parvatiensis 456163 Bacteria Bacteria 412 8.64e-111   NTclustered gi|982539283|gb|CP014141.1| 456163 g70222 i0 97.51 2.90871369294606 241 6 100 0 1 241 494381 494621 Thermus parvatiensis strain RL, complete genome blastn 701 412 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus parvatiensis
23530334 23530334 PRJNA603943_P_NODE_61299_length_246_cov_0.890173_g61107_i0 PRJNA603943 61299 246 0.890173 2.18982558 Thermus sp. NEB1569 2918899 Bacteria Bacteria 381 2.5e-101   NTclustered gi|2199052145|gb|CP092445.1| 2918899 g61107 i0 95.781 10.8211382113821 237 8 96 2 11 246 1120305 1120540 Thermus sp. NEB1569 chromosome, complete genome blastn 2662 381 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus sp. NEB1569
24803742 24803742 PRJNA603943_P_NODE_50620_length_257_cov_1.282609_g50428_i0 PRJNA603943 50620 257 1.282609 3.29630513 Deinococcus ficus 317577 Bacteria Bacteria 460 3.28e-125   NTclustered gi|1220364820|gb|CP021082.1| 317577 g50428 i0 99.216 0.992217898832685 255 2 99 0 3 257 521027 520773 Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence blastn 255 460 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus ficus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;