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contig_metadata

20 rows where analysis = "blastn", bioproject = "PRJNA603943" and tax_clade = "Sar"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Sar · 20 ✖

bioproject 1

  • PRJNA603943 · 20 ✖

analysis 1

  • blastn · 20 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
577561 577561 PRJNA603943_P_NODE_52861_length_251_cov_0.865169_g52669_i0 PRJNA603943 52861 251 0.865169 2.17157419 Blastocystis hominis 12968 SAR_Eukaryotes SAR_Eukaryotes 368 1.99e-97   NTclustered gi|8918241|dbj|AB023581.1| 12968 g52669 i0 99.024 39.589641434263 205 2 82 0 47 251 1107 1311 Blastocystis hominis mRNA for vacuolar ATPase B subunit, complete cds blastn 9937 368 1 Eukaryota Sar     Bigyra Opalinata Blastocystidae Blastocystis Blastocystis hominis
1143118 1143118 PRJNA603943_P_NODE_39181_length_294_cov_2.574661_g38989_i0 PRJNA603943 39181 294 2.574661 7.56950334 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 508 1.35e-139   NTclustered gi|2651357791|gb|PP174306.1| 41631 g38989 i0 97.959 86.5476190476191 294 4 100 1 1 294 2359 2068 Colpoda sp. isolate JGP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 25445 508 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
1853650 1853650 PRJNA603943_P_NODE_6262_length_613_cov_12.059259_g6076_i0 PRJNA603943 6262 613 12.059259 73.92325767 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 243 3.3600000000000007e-59   NTclustered gi|673019759|ref|XM_008865619.1| 157072 g6076 i0 79.05 13.6933115823817 358 71 58 4 104 459 482 127 Aphanomyces invadans 40S ribosomal protein S23 mRNA blastn 8394 243 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
3129132 3129132 PRJNA603943_P_NODE_9263_length_521_cov_2.555804_g9074_i0 PRJNA603943 9263 521 2.555804 13.31573884 Spumella-like flagellate JBAF32 293190 SAR_Eukaryotes SAR_Eukaryotes 586 1.13e-162   NTclustered gi|161015614|gb|EF577217.1| 293190 g9074 i0 87.066 100.030710172745 518 67 99 0 1 518 104 621 Spumella-like flagellate JBAF32 alpha-tubulin gene, partial cds blastn 52116 586 1 Eukaryota Sar     Chrysophyceae       Spumella-like flagellate JBAF32
4404895 4404895 PRJNA603943_P_NODE_40224_length_291_cov_0.871560_g40032_i0 PRJNA603943 40224 291 0.87156 2.5362396 Cryptosporidium sp. horse genotype 564992 SAR_Eukaryotes SAR_Eukaryotes 353 6.599999999999998e-93   NTclustered gi|2274500370|gb|ON419491.1| 564992 g40032 i0 89.362 97.1030927835052 282 28 97 2 8 288 43 323 Cryptosporidium sp. horse genotype isolate HN16 actin gene, partial cds blastn 28257 353 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium sp. horse genotype
4405256 4405256 PRJNA603943_P_NODE_53224_length_251_cov_0.865169_g53032_i0 PRJNA603943 53224 251 0.865169 2.17157419 Plasmodium falciparum 5833 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|296005543|ref|XM_002809043.1| 36329 g53032 i0 96.97 0.386454183266932 33 1 13 0 7 39 3300 3268 Plasmodium falciparum 3D7 conserved Plasmodium protein, unknown function (PF3D7_1359600), partial mRNA blastn 97 56.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
4971236 4971236 PRJNA603943_P_NODE_32464_length_319_cov_1.560976_g32272_i0 PRJNA603943 32464 319 1.560976 4.97951344 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 222 2.15e-53   NTclustered gi|676383892|ref|XM_009036977.1| 44056 g32272 i0 81.618 70.4388714733542 272 47 85 3 9 279 1329 1060 Aureococcus anophagefferens hypothetical protein partial mRNA blastn 22470 222 1 Eukaryota Sar     Pelagophyceae Pelagomonadales Pelagomonadaceae Aureococcus Aureococcus anophagefferens
8229875 8229875 PRJNA603943_P_NODE_20427_length_380_cov_1.003257_g20235_i0 PRJNA603943 20427 380 1.003257 3.8123766 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 246 1.55e-60   NTclustered gi|59894163|gb|AY729864.1| 74557 g20235 i0 78.904 86.7868421052632 365 75 96 2 17 380 1307 944 Thraustotheca clavata heat shock protein 90 gene, partial cds blastn 32979 246 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
10781123 10781123 PRJNA603943_P_NODE_269_length_2116_cov_2.628977_g217_i0 PRJNA603943 269 2116 2.628977 55.62915332 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 289359 SAR_Eukaryotes SAR_Eukaryotes 1746 0   NTclustered gi|53829571|gb|AY582838.1| 289359 g217 i0 97.368 69.7778827977316 1026 27 48 0 116 1141 1 1026 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 HSP70 gene, partial cds blastn 147650 1746 1 Eukaryota Sar             Stramenopile sp. ex Nuclearia delicatula CCAP1552/1
12057084 12057084 PRJNA603943_P_NODE_61690_length_246_cov_0.890173_g61498_i0 PRJNA603943 61690 246 0.890173 2.18982558 Blastocystis sp. subtype 3 944168 SAR_Eukaryotes SAR_Eukaryotes 455 1.4500000000000002e-123   NTclustered gi|1079281423|gb|HQ909888.2| 944168 g61498 i0 100 4 246 0 100 0 1 246 25240 24995 Blastocystis sp. subtype 3 strain DMP/IH478 mitochondrion, complete genome blastn 984 455 1 Eukaryota Sar     Bigyra Opalinata Blastocystidae Blastocystis Blastocystis sp. subtype 3
14605985 14605985 PRJNA603943_P_NODE_35052_length_309_cov_1.305085_g34860_i0 PRJNA603943 35052 309 1.305085 4.03271265 Phytophthora nicotianae 4792 SAR_Eukaryotes SAR_Eukaryotes 252 2.65e-62   NTclustered gi|675210554|ref|XM_008915914.1| 761204 g34860 i0 81.494 72.7281553398058 308 55 99 2 2 308 571 877 Phytophthora parasitica INRA-310 ATP-dependent RNA helicase eIF4A partial mRNA blastn 22473 252 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
14606151 14606151 PRJNA603943_P_NODE_40452_length_290_cov_1.064516_g40260_i0 PRJNA603943 40452 290 1.064516 3.0870964 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 464 2.9099999999999993e-126   NTclustered gi|2651357791|gb|PP174306.1| 41631 g40260 i0 95.517 105.5 290 13 100 0 1 290 3390 3679 Colpoda sp. isolate JGP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 30595 464 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
15171185 15171185 PRJNA603943_P_NODE_10532_length_494_cov_4.078385_g10341_i0 PRJNA603943 10532 494 4.078385 20.1472219 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 907 0   NTclustered gi|14495562|gb|L21708.2|PFA34K 5821 g10341 i0 99.798 99.0728744939271 494 1 100 0 1 494 1308 815 Plasmodium berghei p23-like protein mRNA, partial cds blastn 48942 913 0.993428258488499 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium berghei
15880528 15880528 PRJNA603943_P_NODE_54893_length_250_cov_0.870056_g54701_i0 PRJNA603943 54893 250 0.870056 2.17514 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 250 7.48e-62   NTclustered gi|146185323|ref|XM_001031586.2| 312017 g54701 i0 88.78 0.82 205 21 82 2 47 250 391 188 Tetrahymena thermophila SB210 40S ribosomal protein S13 partial mRNA blastn 205 250 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
16445923 16445923 PRJNA603943_P_NODE_5333_length_656_cov_2.355060_g5151_i0 PRJNA603943 5333 656 2.35506 15.4491936 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 488 4.199999999999999e-133   NTclustered gi|9858457|gb|AF085344.1|AF085344 82926 g5151 i0 86.057 67.7256097560976 459 59 70 4 50 506 28 483 Pythium splendens calmodulin mRNA, complete cds blastn 44428 492 0.991869918699187 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
17154441 17154441 PRJNA603943_P_NODE_23354_length_361_cov_2.118056_g23162_i0 PRJNA603943 23354 361 2.118056 7.64618216 Leukarachnion sp. ATCC PRA-24 568390 SAR_Eukaryotes SAR_Eukaryotes 161 5.45e-35   NTclustered gi|2727570083|gb|PP760457.1| 568390 g23162 i0 84.524 6.18282548476454 168 21 45 4 198 361 2284 2450 Leukarachnion sp. ATCC PRA-24 culture ATCC:BJ-24B2 mitochondrion, complete genome blastn 2232 161 1 Eukaryota Sar             Leukarachnion sp. ATCC PRA-24
17154864 17154864 PRJNA603943_P_NODE_37994_length_299_cov_0.902655_g37802_i0 PRJNA603943 37994 299 0.902655 2.69893845 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 191 5.65e-44   NTclustered gi|301114940|ref|XM_002999194.1| 403677 g37802 i0 79.699 11.3979933110368 266 52 89 2 35 299 854 590 Phytophthora infestans T30-4 pyrophosphate-energized vacuolar membrane proton pump, putative (PITG_05615), partial mRNA blastn 3408 191 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
20978687 20978687 PRJNA603943_P_NODE_10697_length_491_cov_8.131579_g10506_i0 PRJNA603943 10697 491 8.131579 39.92605289 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 281 5.61e-71   NTclustered gi|698807229|ref|XM_009838342.1| 112090 g10506 i0 80.533 68.8146639511202 375 65 75 4 121 488 441 68 Aphanomyces astaci polyubiquitin mRNA blastn 33788 281 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
20979602 20979602 PRJNA603943_P_NODE_4437_length_708_cov_3.820472_g4259_i0 PRJNA603943 4437 708 3.820472 27.04894176 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 289359 SAR_Eukaryotes SAR_Eukaryotes 941 0   NTclustered gi|53829589|gb|AY582847.1| 289359 g4259 i0 99.612 70.1186440677966 515 2 73 0 1 515 389 903 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 actin gene, partial cds blastn 49644 941 1 Eukaryota Sar             Stramenopile sp. ex Nuclearia delicatula CCAP1552/1
23530552 23530552 PRJNA603943_P_NODE_679_length_1521_cov_27.987569_g598_i0 PRJNA603943 679 1521 27.987569 425.69092449 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 289359 SAR_Eukaryotes SAR_Eukaryotes 2235 0   NTclustered gi|53829555|gb|AY582830.1| 289359 g598 i0 99.352 85.5351742274819 1234 8 81 0 181 1414 1238 5 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 ef1a gene, partial cds blastn 130099 2235 1 Eukaryota Sar             Stramenopile sp. ex Nuclearia delicatula CCAP1552/1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;