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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA603943" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 8 ✖

bioproject 1

  • PRJNA603943 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2418281 2418281 PRJNA603943_P_NODE_12742_length_457_cov_1.809896_g12550_i0 PRJNA603943 12742 457 1.809896 8.27122472 Naegleria 5761 Heterolobosea other_Eukaryota 174 9.07e-39   NTclustered gi|2618963742|gb|OR769034.1| 5762 g12550 i0 84.971 27.9956236323851 173 25 38 1 221 393 5057 5228 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 12794 174 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
6955505 6955505 PRJNA603943_P_NODE_3826_length_756_cov_4.632504_g3650_i0 PRJNA603943 3826 756 4.632504 35.02173024 Acrasis rosea 43695 Heterolobosea other_Eukaryota 699 0   NTclustered gi|12083876|gb|AF190771.1|AF190771 43695 g3650 i0 84.714 64.0648148148148 700 105 92 2 56 754 1204 506 Acrasis rosea elongation factor 1 alpha (tef1) gene, partial cds blastn 48433 699 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis rosea
9505143 9505143 PRJNA603943_P_NODE_24768_length_353_cov_2.200000_g24576_i0 PRJNA603943 24768 353 2.2 7.766 Tsukubamonas globosa 875863 Root_unresolved Root_unresolved 287 8.410000000000001e-73   NTclustered gi|323575411|dbj|AB576859.1| 875863 g24576 i0 85.818 84.8243626062323 275 33 77 6 79 351 1349 1079 Tsukubamonas globosa EF2 mRNA for elongation factor 2, partial cds blastn 29943 287 1 Eukaryota Discoba       Tsukubamonadida Tsukubamonadidae Tsukubamonas Tsukubamonas globosa
19703476 19703476 PRJNA603943_P_NODE_28616_length_335_cov_1.114504_g28424_i0 PRJNA603943 28616 335 1.114504 3.7335884 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 464 3.4199999999999996e-126   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g28424 i0 91.642 3.74925373134328 335 28 100 0 1 335 2593 2259 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1256 464 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
20979101 20979101 PRJNA603943_P_NODE_26737_length_343_cov_2.062963_g26545_i0 PRJNA603943 26737 343 2.062963 7.07596309 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 595 1.1899999999999999e-165   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g26545 i0 97.965 24.9679300291545 344 6 100 1 1 343 3689 4032 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 8564 595 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
22253828 22253828 PRJNA603943_P_NODE_23598_length_360_cov_1.073171_g23406_i0 PRJNA603943 23598 360 1.073171 3.8634156 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 610 4.489999999999999e-170   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g23406 i0 97.222 28.7388888888889 360 10 100 0 1 360 2223 1864 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 10346 610 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
23530349 23530349 PRJNA603943_P_NODE_61719_length_246_cov_0.890173_g61527_i0 PRJNA603943 61719 246 0.890173 2.18982558 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 137 5.96e-28   NTclustered gi|2124402762|ref|XM_044685787.1| 51637 g61527 i0 82.209 2.02032520325203 163 25 65 3 13 173 568 728 Naegleria lovaniensis uncharacterized protein (C9374_010262), partial mRNA blastn 497 137 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
24802793 24802793 PRJNA603943_P_NODE_17560_length_402_cov_3.674772_g17368_i0 PRJNA603943 17560 402 3.674772 14.77258344 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 244 5.92e-60   NTclustered gi|1002449054|ref|XM_015802556.1| 157538 g17368 i0 82.168 25.1169154228856 286 49 71 2 97 381 84 368 Leptomonas pyrrhocoris putative mitochondrial 40s ribosomal protein S15a mRNA blastn 10097 244 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;