RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA602115" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA602115 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8795693 8795693 PRJNA602115_P_NODE_1607_length_469_cov_4.144608_g1582_i0 PRJNA602115 1607 469 4.144608 19.43821152 Ploima 84394 Rotifera other_Eukaryota 291 8.88e-74   NTclustered gi|1859640894|gb|MN970216.1| 360698 g1582 i0 78.696 10.2430703624733 460 81 96 16 1 452 12070 12520 Proales similis mitochondrion, complete genome blastn 4804 292 0.996575342465753 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Proalidae Proales Proales similis
16445586 16445586 PRJNA602115_P_NODE_3193_length_340_cov_1.129032_g3168_i0 PRJNA602115 3193 340 1.129032 3.8387088 Ploima 84394 Rotifera other_Eukaryota 303 8.03e-78   NTclustered gi|401880285|gb|JX216710.1| 1225247 g3168 i0 83.434 94.9205882352941 332 49 97 5 11 339 660 332 Lecane ohioensis voucher ECOCHZ-AG0714 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial blastn 32273 303 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane ohioensis
25369195 25369195 PRJNA602115_P_NODE_1280_length_522_cov_2.221258_g1255_i0 PRJNA602115 1280 522 2.221258 11.59496676 Brachionus 10194 Rotifera other_Eukaryota 405 3.41e-108   NTclustered gi|1802791198|gb|MN256531.1| 392764 g1255 i0 82.093 72.9827586206897 497 67 93 18 30 517 11343 11826 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 38097 407 0.995085995085995 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;