RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA602115" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA602115 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
575722 575722 PRJNA602115_P_NODE_5661_length_267_cov_1.242718_g5636_i0 PRJNA602115 5661 267 1.242718 3.31805706 Heterotextus miltinus 1175238 Fungi Fungi 255 1.73e-63   NTclustered gi|1971784526|gb|MN580347.1| 1175238 g5636 i0 84.151 100.524344569288 265 40 99 2 1 264 782 519 Heterotextus miltinus voucher TENN 42208 translation elongation factor 1-alpha gene, partial cds blastn 26840 255 1 Eukaryota Opisthokonta Fungi Basidiomycota Dacrymycetes Dacrymycetales Dacrymycetaceae Heterotextus Heterotextus miltinus
4403370 4403370 PRJNA602115_P_NODE_3404_length_330_cov_1.263941_g3379_i0 PRJNA602115 3404 330 1.263941 4.1710053 Guyanagaster necrorhizus 856835 Fungi Fungi 176 1.77e-39   NTclustered gi|2085324759|ref|XM_043186217.1| 1450536 g3379 i0 83.784 7.53939393939394 185 30 56 0 6 190 326 142 Guyanagaster necrorhizus MCA 3950 ribosomal protein S5 (BT62DRAFT_931833), mRNA blastn 2488 176 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Physalacriaceae Guyanagaster Guyanagaster necrorhizus
18427638 18427638 PRJNA602115_P_NODE_1215_length_534_cov_1.600423_g1190_i0 PRJNA602115 1215 534 1.600423 8.54625882 Tilletiopsis washingtonensis 58919 Fungi Fungi 56.5 0.004   NTclustered gi|1423581197|ref|XM_025745741.1| 58919 g1190 i0 100 0.0561797752808989 30 0 6 0 229 258 374 345 Tilletiopsis washingtonensis hypothetical protein (FA09DRAFT_61677), mRNA blastn 30 56.5 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Entylomatales   Tilletiopsis Tilletiopsis washingtonensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;