RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA602115" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA602115 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6954146 6954146 PRJNA602115_P_NODE_8966_length_209_cov_0.864865_g8941_i0 PRJNA602115 8966 209 0.864865 1.80756785 Emericellopsis atlantica 2614577 Fungi Fungi 211 2.86e-50   NTclustered gi|2185263636|ref|XM_046264011.1| 2614577 g8941 i0 86.364 53.1961722488038 198 22 93 5 11 204 339 143 Emericellopsis atlantica 60s acidic ribosomal protein-domain-containing protein (F5Z01DRAFT_663096), mRNA blastn 11118 211 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Bionectriaceae Emericellopsis Emericellopsis atlantica
7520749 7520749 PRJNA602115_P_NODE_6186_length_256_cov_1.097436_g6161_i0 PRJNA602115 6186 256 1.097436 2.80943616 Zymoseptoria 1047167 Fungi Fungi 52.8 0.023   NTclustered gi|398407462|ref|XM_003855149.1| 336722 g6161 i0 96.774 0.2421875 31 1 12 0 188 218 5779 5809 Zymoseptoria tritici IPO323 uncharacterized protein (MYCGRDRAFT_108354), partial mRNA blastn 62 52.8 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Mycosphaerellaceae Zymoseptoria Zymoseptoria tritici
10779900 10779900 PRJNA602115_P_NODE_10389_length_205_cov_0.888889_g10364_i0 PRJNA602115 10389 205 0.888889 1.82222245 Aureobasidium pullulans 5580 Fungi Fungi 374 3.3599999999999997e-99   NTclustered gi|2832839268|gb|CP139017.1| 5580 g10364 i0 99.512 94.0487804878049 205 1 100 0 1 205 1281 1077 Aureobasidium pullulans isolate CG163 mitochondrion, complete genome blastn 19280 374 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Dothideales Saccotheciaceae Aureobasidium Aureobasidium pullulans
10780078 10780078 PRJNA602115_P_NODE_6409_length_251_cov_1.331579_g6384_i0 PRJNA602115 6409 251 1.331579 3.34226329 Verticillium alfalfae 1051613 Fungi Fungi 254 5.81e-63   NTclustered gi|302411022|ref|XM_003003299.1| 526221 g6384 i0 85.039 91.2270916334661 254 32 100 6 1 251 406 156 Verticillium alfalfae VaMs.102 40S ribosomal protein S14 mRNA blastn 22898 254 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Glomerellales Plectosphaerellaceae Verticillium Verticillium alfalfae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;