RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA602115" and tax_kingdom = "Pararnavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 2 ✖

bioproject 1

  • PRJNA602115 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10779979 10779979 PRJNA602115_P_NODE_3009_length_350_cov_1.013841_g2984_i0 PRJNA602115 3009 350 1.013841 3.5484435 Retroviridae sp. 2681591 Viruses Viruses 625 1.5499999999999995e-174   NTclustered gi|2896100155|gb|PQ791973.1| 2681591 g2984 i0 99.135 1.98285714285714 347 3 99 0 1 347 2476 2822 MAG: Retroviridae sp. isolate Hpika254_retro1 genomic sequence blastn 694 625 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae   Retroviridae sp.
23528089 23528089 PRJNA602115_P_NODE_2599_length_375_cov_1.187898_g2574_i0 PRJNA602115 2599 375 1.187898 4.4546175 Retroviridae sp. 2681591 Viruses Viruses 255 2.53e-63   NTclustered gi|2896100019|gb|PQ791907.1| 2681591 g2574 i0 98.611 0.384 144 2 38 0 1 144 144 1 MAG: Retroviridae sp. isolate Hpika137_retro1 genomic sequence blastn 144 255 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae   Retroviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;