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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA600413" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA600413 · 11 ✖

analysis 1

  • blastn · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2417894 2417894 PRJNA600413_P_NODE_76662_length_182_cov_1.330827_g75961_i0 PRJNA600413 76662 182 1.330827 2.42210514 Glugea 36736 Fungi Fungi 219 1.44e-52   NTclustered gi|16605611|emb|AJ295329.1| 144521 g75961 i0 90 93.9010989010989 170 15 93 2 9 177 1220 1388 Unidentified microsporidian MYX1 partial 16S rRNA gene, ITS and partial 23S rRNA gene blastn 17090 220 0.995454545454545 Eukaryota Opisthokonta Fungi Microsporidia         unidentified microsporidian MYX1
3123816 3123816 PRJNA600413_P_NODE_10683_length_452_cov_26.444169_g9984_i0 PRJNA600413 10683 452 26.444169 119.52764388 Pseudoloma neurophilia 146866 Fungi Fungi 833 0   NTclustered gi|11993647|gb|AF322654.1| 146866 g9984 i0 100 98.8606194690265 451 0 99 0 2 452 1335 885 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 44685 833 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
3126211 3126211 PRJNA600413_P_NODE_87723_length_175_cov_1.579365_g87022_i0 PRJNA600413 87723 175 1.579365 2.76388875 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 150 5.079999999999999e-32   NTclustered gi|2522768008|gb|OR162445.1| 646526 g87022 i0 89.744 0.668571428571429 117 12 67 0 59 175 2280 2396 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 117 150 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
4401105 4401105 PRJNA600413_P_NODE_147684_length_161_cov_0.910714_g146983_i0 PRJNA600413 147684 161 0.910714 1.46624954 Vavraia culicis 103449 Fungi Fungi 91.6 2.83e-14   NTclustered gi|667633188|ref|XM_008075686.1| 948595 g146983 i0 85.227 0.546583850931677 88 13 55 0 46 133 8 95 Vavraia culicis subsp. floridensis small GTP-binding protein domain (VCUG_00857), partial mRNA blastn 88 91.6 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Vavraia Vavraia culicis
5677619 5677619 PRJNA600413_P_NODE_28325_length_266_cov_7.248848_g27624_i0 PRJNA600413 28325 266 7.248848 19.28193568 Vavraia culicis 103449 Fungi Fungi 287 6.130000000000001e-73   NTclustered gi|667636757|ref|XR_552273.1| 948595 g27624 i0 87.059 1.92481203007519 255 32 96 1 1 255 2362 2615 Vavraia culicis subsp. floridensis 28S ribosomal RNA (VCUG_02832), partial rRNA blastn 512 287 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Vavraia Vavraia culicis
9503770 9503770 PRJNA600413_P_NODE_96348_length_170_cov_1.570248_g95647_i0 PRJNA600413 96348 170 1.570248 2.6694216 Ecytonucleospora schreckii 2902180 Fungi Fungi 235 1.3199999999999998e-57   NTclustered gi|2162236384|gb|OL780325.1| 2902180 g95647 i0 91.765 99.8176470588235 170 12 99 2 1 169 100 268 Enterocytozoon schreckii isolate CC-2721 small subunit ribosomal RNA gene, partial sequence blastn 16969 235 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora schreckii
14602178 14602178 PRJNA600413_P_NODE_137672_length_162_cov_1.663717_g136971_i0 PRJNA600413 137672 162 1.663717 2.69522154 Nematocida displodere 1805483 Fungi Fungi 71.3 3.72e-8   NTclustered gi|2797490813|ref|XM_067688610.1| 1805483 g136971 i0 90.566 0.91358024691358 53 5 33 0 105 157 794 742 Nematocida displodere serine/threonine-protein phosphatase 2A catalytic subunit (NEDG_01192), partial mRNA blastn 148 71.3 1 Eukaryota Opisthokonta Fungi Microsporidia       Nematocida Nematocida displodere
14603417 14603417 PRJNA600413_P_NODE_532_length_1698_cov_15.531231_g358_i0 PRJNA600413 532 1698 15.531231 263.72030238 Pleistophora mulleri 249366 Fungi Fungi 1615 0   NTclustered gi|134147422|gb|EF119339.1| 249366 g358 i0 83.984 35.9393404004711 1742 210 100 58 1 1698 3091 1375 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 61025 1615 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri
23526249 23526249 PRJNA600413_P_NODE_2639_length_897_cov_25.336085_g2164_i0 PRJNA600413 2639 897 25.336085 227.26468245 Pseudoloma neurophilia 146866 Fungi Fungi 1650 0   NTclustered gi|11993647|gb|AF322654.1| 146866 g2164 i0 99.777 96.8416945373467 897 2 100 0 1 897 914 18 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 86867 1650 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
23526384 23526384 PRJNA600413_P_NODE_31999_length_252_cov_1.064039_g31298_i0 PRJNA600413 31999 252 1.064039 2.68137828 Heterosporis sp. NBDP-2013a 1289055 Fungi Fungi 130 1.03e-25   NTclustered gi|448278458|gb|KC137554.1| 1289055 g31298 i0 90 7.34523809523809 100 10 40 0 153 252 2852 2951 Heterosporis sp. NBDP-2013a isolate MN/CISCO small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1851 130 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Heterosporis Heterosporis sp. NBDP-2013a
24801073 24801073 PRJNA600413_P_NODE_68120_length_187_cov_3.159420_g67419_i0 PRJNA600413 68120 187 3.15942 5.9081154 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 196 6.989999999999999e-46   NTclustered gi|2522768008|gb|OR162445.1| 646526 g67419 i0 85.561 1 187 27 100 0 1 187 2935 2749 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 187 196 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;