RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA600413" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA600413 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4969770 4969770 PRJNA600413_P_NODE_108204_length_166_cov_1.743590_g107503_i0 PRJNA600413 108204 166 1.74359 2.8943594 Anthozoa 6101 Cnidaria other_Eukaryota 139 1.04e-28   NTclustered gi|2918369553|emb|OZ237725.1| 317547 g107503 i0 100 489.289156626506 75 0 45 0 4 78 3110245 3110171 Eunicella cavolini genome assembly, chromosome: 9 blastn 81222 139 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
15169919 15169919 PRJNA600413_P_NODE_110572_length_166_cov_0.871795_g109871_i0 PRJNA600413 110572 166 0.871795 1.4471797 Metazoa 33208 Cnidaria other_Eukaryota 56.5 0.001   NTclustered gi|2917940720|emb|OZ237562.1| 6108 g109871 i0 100 10.0120481927711 30 0 18 0 21 50 883504 883533 Anemonia sulcata genome assembly, chromosome: 8 blastn 1662 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
15170676 15170676 PRJNA600413_P_NODE_59972_length_194_cov_4.820690_g59271_i0 PRJNA600413 59972 194 4.82069 9.3521386 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 209 9.39e-50   NTclustered gi|2812095675|ref|XR_011129204.1| 246305 g59271 i0 91.447 18.5515463917526 152 13 78 0 17 168 12907 13058 PREDICTED: Montipora capricornis uncharacterized lncRNA (LOC138034778), ncRNA blastn 3599 209 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Montipora Montipora capricornis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;