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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA600413" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA600413 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
573025 573025 PRJNA600413_P_NODE_121121_length_165_cov_0.879310_g120420_i0 PRJNA600413 121121 165 0.87931 1.4508615 Geothrix sp. PMB-07 3068640 Bacteria Bacteria 261 2.11e-65   NTclustered gi|2563347696|gb|CP132333.1| 3068640 g120420 i0 95.152 3.78181818181818 165 8 100 0 1 165 2879708 2879872 Geothrix sp. PMB-07 chromosome, complete genome blastn 624 261 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales Holophagaceae Geothrix Geothrix sp. PMB-07
573167 573167 PRJNA600413_P_NODE_131201_length_163_cov_0.894737_g130500_i0 PRJNA600413 131201 163 0.894737 1.45842131 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 124 2.84e-24   NTclustered gi|2874253836|emb|OY969886.1| 171953 g130500 i0 80.892 0.96319018404908 157 30 96 0 7 163 3678366 3678210 MAG: uncultured Acidobacteriota bacterium isolate MFD10007.bin.c.1 genome assembly, chromosome: 1 blastn 157 124 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
5678027 5678027 PRJNA600413_P_NODE_43765_length_220_cov_1.192982_g43064_i0 PRJNA600413 43765 220 1.192982 2.6245604 uncultured Bryobacterales bacterium 2569091 Bacteria Bacteria 193 1.1e-44   NTclustered gi|2546137838|emb|OY282420.1| 2569091 g43064 i0 83.568 2.23181818181818 213 28 95 5 12 220 2023511 2023720 MAG: uncultured Bryobacterales bacterium isolate 78526416-339a-45b8-a6d3-8fabb82c2801 genome assembly, chromosome: 1 blastn 491 193 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     uncultured Bryobacterales bacterium
6951756 6951756 PRJNA600413_P_NODE_153446_length_157_cov_2.694444_g152745_i0 PRJNA600413 153446 157 2.694444 4.23027708 Mesoterricola silvestris 2927979 Bacteria Bacteria 65.8 1.66e-6   NTclustered gi|2490891634|dbj|AP027080.1| 2927979 g152745 i0 93.182 2.70700636942675 44 3 28 0 114 157 2668670 2668713 Mesoterricola silvestris W79 DNA, complete genome blastn 425 65.8 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales Holophagaceae Mesoterricola Mesoterricola silvestris
9503493 9503493 PRJNA600413_P_NODE_78968_length_180_cov_1.961832_g78267_i0 PRJNA600413 78968 180 1.961832 3.5312976 Paludibaculum fermentans 1473598 Bacteria Bacteria 220 3.96e-53   NTclustered gi|1929489624|gb|CP063849.1| 1473598 g78267 i0 89.385 205.216666666667 179 13 99 4 1 179 4784768 4784596 Paludibaculum fermentans strain P105 chromosome, complete genome blastn 36939 220 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae Paludibaculum Paludibaculum fermentans
10777307 10777307 PRJNA600413_P_NODE_115909_length_165_cov_1.620690_g115208_i0 PRJNA600413 115909 165 1.62069 2.6741385 Paludibaculum fermentans 1473598 Bacteria Bacteria 219 1.29e-52   NTclustered gi|1929489624|gb|CP063849.1| 1473598 g115208 i0 91.72 57.2969696969697 157 13 95 0 1 157 2094245 2094401 Paludibaculum fermentans strain P105 chromosome, complete genome blastn 9454 219 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae Paludibaculum Paludibaculum fermentans
13329204 13329204 PRJNA600413_P_NODE_85791_length_176_cov_1.606299_g85090_i0 PRJNA600413 85791 176 1.606299 2.82708624 Geothrix sp. 21YS21S-4 3068889 Bacteria Bacteria 270 3.77e-68   NTclustered gi|2565867660|gb|CP132719.1| 3068889 g85090 i0 94.318 26.9375 176 10 100 0 1 176 3007487 3007662 Geothrix sp. 21YS21S-4 chromosome, complete genome blastn 4741 270 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales Holophagaceae Geothrix Geothrix sp. 21YS21S-4
13329306 13329306 PRJNA600413_P_NODE_90991_length_173_cov_1.483871_g90290_i0 PRJNA600413 90991 173 1.483871 2.56709683 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 307 2.81e-79   NTclustered gi|630059916|gb|KJ191781.1| 171953 g90290 i0 98.837 97.0924855491329 172 2 99 0 1 172 4 175 Uncultured Acidobacteria bacterium clone CB12 16S ribosomal RNA gene, partial sequence blastn 16797 307 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
14604268 14604268 PRJNA600413_P_NODE_95752_length_170_cov_1.685950_g95051_i0 PRJNA600413 95752 170 1.68595 2.866115 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 176 8.09e-40   NTclustered gi|2621701418|emb|OY760136.1| 2910147 g95051 i0 90.299 28.8764705882353 134 13 79 0 27 160 2855678 2855811 MAG: Vicinamibacterales bacterium isolate f9e760c9-8bbe-4e76-9a0a-40d6f1fb97b8 genome assembly, chromosome: 1 blastn 4909 176 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
17151739 17151739 PRJNA600413_P_NODE_3654_length_773_cov_4.301105_g3092_i0 PRJNA600413 3654 773 4.301105 33.24754165 Paludibaculum fermentans 1473598 Bacteria Bacteria 774 0   NTclustered gi|1929489624|gb|CP063849.1| 1473598 g3092 i0 85.204 91.4825355756792 784 82 100 28 1 773 4785537 4786297 Paludibaculum fermentans strain P105 chromosome, complete genome blastn 70716 774 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae Paludibaculum Paludibaculum fermentans
18424736 18424736 PRJNA600413_P_NODE_104215_length_167_cov_0.864407_g103514_i0 PRJNA600413 104215 167 0.864407 1.44355969 uncultured Acidobacteriaceae bacterium 194844 Bacteria Bacteria 102 1.37e-17   NTclustered gi|2874253980|emb|OY970305.1| 194844 g103514 i0 77.844 1.26347305389222 167 35 99 2 2 167 384912 385077 MAG: uncultured Acidobacteriaceae bacterium isolate MFD03726.bin.c.10 genome assembly, chromosome: 1 blastn 211 102 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   uncultured Acidobacteriaceae bacterium
24799499 24799499 PRJNA600413_P_NODE_139480_length_162_cov_0.902655_g138779_i0 PRJNA600413 139480 162 0.902655 1.4623011 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 52.8 0.013   NTclustered gi|2621704042|emb|OY760734.1| 2910147 g138779 i0 100 0.172839506172839 28 0 17 0 86 113 2847784 2847757 MAG: Vicinamibacterales bacterium isolate 10b48155-431e-4809-9d43-759f23ff96f9 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;