RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA600413" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA600413 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8794916 8794916 PRJNA600413_P_NODE_27_length_5381_cov_18.824269_g16_i0 PRJNA600413 27 5381 18.824269 1012.93391489 root 1 Root_unresolved Root_unresolved 9897 0   NTclustered gi|56160492|ref|AC_000007.1| 10515 g16 i0 99.888 99.963947221706 5379 2 99 3 5 5381 10861 16237 Human adenovirus 2, complete genome blastn 537906 9897 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
16445267 16445267 PRJNA600413_P_NODE_72113_length_185_cov_1.389706_g71412_i0 PRJNA600413 72113 185 1.389706 2.5709561 Viruses 10239 Viruses Viruses 52.8 0.016   NTclustered gi|2755084441|gb|PP943425.1| 10258 g71412 i0 100 0.302702702702703 28 0 15 0 1 28 67613 67586 Orf virus isolate FX10, partial genome blastn 56 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Parapoxvirus Parapoxvirus orf
24093731 24093731 PRJNA600413_P_NODE_127039_length_164_cov_0.886957_g126338_i0 PRJNA600413 127039 164 0.886957 1.45460948 Iridovirus 10487 Viruses Viruses 63.9 6.33e-6   NTclustered gi|1883603164|gb|MN019923.1| 176652 g126338 i0 90.385 2.66463414634146 52 0 31 4 56 106 174789 174742 Invertebrate iridescent virus 6 strain T1, partial genome blastn 437 63.9 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae Iridovirus Iridovirus chilo1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;