RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA600413" and tax_clade = "Stenosarchaea group"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 6 ✖

bioproject 1

  • PRJNA600413 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3124792 3124792 PRJNA600413_P_NODE_24823_length_285_cov_1.974576_g24122_i0 PRJNA600413 24823 285 1.974576 5.6275416 Natronomonas gomsonensis 1046043 Archaea Archaea 76.8 1.56e-9   NTclustered gi|2273673090|gb|CP101323.1| 1046043 g24122 i0 97.727 0.919298245614035 44 1 15 0 29 72 1095640 1095597 Natronomonas gomsonensis strain KCTC 4088 chromosome, complete genome blastn 262 76.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas gomsonensis
5678786 5678786 PRJNA600413_P_NODE_79305_length_180_cov_1.557252_g78604_i0 PRJNA600413 79305 180 1.557252 2.8030536 Halobellus limi 699433 Archaea Archaea 106 1.16e-18   NTclustered gi|1621075116|gb|CP031311.1| 699433 g78604 i0 81.295 0.772222222222222 139 18 75 8 46 180 2818311 2818177 Halobellus limi strain CGMCC 1.10331 chromosome, complete genome blastn 139 106 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halobellus Halobellus limi
10777808 10777808 PRJNA600413_P_NODE_151029_length_161_cov_0.910714_g150328_i0 PRJNA600413 151029 161 0.910714 1.46624954 Natronorubrum aibiense 348826 Archaea Archaea 130 6.01e-26   NTclustered gi|1770796843|gb|CP045490.1| 348826 g150328 i0 85.95 1.79503105590062 121 17 75 0 3 123 152200 152080 Natronorubrum aibiense strain 7-3 plasmid unnamed2 blastn 289 130 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronorubrum Natronorubrum aibiense
18993364 18993364 PRJNA600413_P_NODE_149895_length_161_cov_0.910714_g149194_i0 PRJNA600413 149895 161 0.910714 1.46624954 Natrialbaceae 1644061 Archaea Archaea 183 4.55e-42   NTclustered gi|2006064443|gb|CP071462.1| 2816475 g149194 i0 87.421 4.83229813664596 159 20 99 0 3 161 416436 416594 Haloterrigena alkaliphila strain KZCA68 chromosome, complete genome blastn 778 183 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Haloterrigena Haloterrigena alkaliphila
23525486 23525486 PRJNA600413_P_NODE_124299_length_164_cov_0.886957_g123598_i0 PRJNA600413 124299 164 0.886957 1.45460948 Halocatena salina 2934340 Archaea Archaea 156 1.01e-33   NTclustered gi|2230625526|gb|CP096019.1| 2934340 g123598 i0 85.333 0.914634146341463 150 22 91 0 1 150 851303 851452 Halocatena salina strain AD-1 chromosome, complete genome blastn 150 156 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Halocatena Halocatena salina
23527243 23527243 PRJNA600413_P_NODE_67259_length_188_cov_1.467626_g66558_i0 PRJNA600413 67259 188 1.467626 2.75913688 Natrononativus amylolyticus 2963434 Archaea Archaea 65.8 2.07e-6   NTclustered gi|2274417431|gb|CP101458.1| 2963434 g66558 i0 100 1.51595744680851 35 0 19 0 121 155 1421098 1421132 Natrononativus amylolyticus strain CGA73 chromosome, complete genome blastn 285 65.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrononativus Natrononativus amylolyticus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;