contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJNA600413" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1141964 | 1141964 | PRJNA600413_P_NODE_155801_length_153_cov_2.865385_g155100_i0 | PRJNA600413 | 155801 | 153 | 2.865385 | 4.38403905 | Gemmata | 113 | Bacteria | Bacteria | 219 | 1.1699999999999999e-52 | NTclustered | gi|1727537522|gb|CP042911.1| | 114 | g155100 | i0 | 93.793 | 2.84313725490196 | 145 | 9 | 95 | 0 | 1 | 145 | 5343564 | 5343420 | Gemmata obscuriglobus strain DSM 5831 chromosome, complete genome | blastn | 435 | 219 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata obscuriglobus | |
| 6953686 | 6953686 | PRJNA600413_P_NODE_97846_length_169_cov_1.700000_g97145_i0 | PRJNA600413 | 97846 | 169 | 1.7 | 2.873 | Tepidisphaeraceae bacterium | 2876886 | Bacteria | Bacteria | 134 | 4.9000000000000005e-27 | NTclustered | gi|2874253799|emb|OY969783.1| | 2876886 | g97145 | i0 | 88.288 | 3.70414201183432 | 111 | 13 | 66 | 0 | 59 | 169 | 4949001 | 4949111 | MAG: Tepidisphaeraceae bacterium isolate MFD04580.bin.c.1 genome assembly, chromosome: 1 | blastn | 626 | 134 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Tepidisphaeraceae bacterium | ||
| 7519475 | 7519475 | PRJNA600413_P_NODE_103206_length_167_cov_0.864407_g102505_i0 | PRJNA600413 | 103206 | 167 | 0.864407 | 1.44355969 | Gemmata | 113 | Bacteria | Bacteria | 128 | 2.26e-25 | NTclustered | gi|1727537522|gb|CP042911.1| | 114 | g102505 | i0 | 81.935 | 3.78443113772455 | 155 | 24 | 92 | 4 | 12 | 164 | 3801861 | 3802013 | Gemmata obscuriglobus strain DSM 5831 chromosome, complete genome | blastn | 632 | 128 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata obscuriglobus | |
| 9502710 | 9502710 | PRJNA600413_P_NODE_41928_length_224_cov_1.165714_g41227_i0 | PRJNA600413 | 41928 | 224 | 1.165714 | 2.61119936 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 303 | 4.98e-78 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g41227 | i0 | 91.781 | 4.25446428571429 | 219 | 17 | 98 | 1 | 2 | 220 | 2018259 | 2018476 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 953 | 303 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 9503569 | 9503569 | PRJNA600413_P_NODE_84268_length_177_cov_1.593750_g83567_i0 | PRJNA600413 | 84268 | 177 | 1.59375 | 2.8209375 | Tautonia plasticadhaerens | 2527974 | Bacteria | Bacteria | 228 | 2.3099999999999997e-55 | NTclustered | gi|1712713678|gb|CP036426.1| | 2527974 | g83567 | i0 | 89.831 | 1.3728813559322 | 177 | 18 | 100 | 0 | 1 | 177 | 2619048 | 2619224 | Tautonia plasticadhaerens strain ElP chromosome | blastn | 243 | 228 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Tautonia | Tautonia plasticadhaerens | |
| 15170716 | 15170716 | PRJNA600413_P_NODE_66292_length_189_cov_1.278571_g65591_i0 | PRJNA600413 | 66292 | 189 | 1.278571 | 2.41649919 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 65.8 | 2.08e-6 | NTclustered | gi|1712502609|gb|CP036270.1| | 2527995 | g65591 | i0 | 90.196 | 1.3015873015873 | 51 | 3 | 29 | 2 | 28 | 77 | 756224 | 756273 | Symmachiella dynata strain Pan258 chromosome | blastn | 246 | 65.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Symmachiella | Symmachiella dynata | |
| 15876211 | 15876211 | PRJNA600413_P_NODE_145993_length_161_cov_0.910714_g145292_i0 | PRJNA600413 | 145993 | 161 | 0.910714 | 1.46624954 | Paludisphaera borealis | 1387353 | Bacteria | Bacteria | 143 | 7.72e-30 | NTclustered | gi|1133581311|gb|CP019082.1| | 1387353 | g145292 | i0 | 87.2 | 48.6086956521739 | 125 | 16 | 78 | 0 | 7 | 131 | 811691 | 811815 | Paludisphaera borealis strain PX4 chromosome, complete genome | blastn | 7826 | 143 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Paludisphaera | Paludisphaera borealis | |
| 15877548 | 15877548 | PRJNA600413_P_NODE_61393_length_193_cov_1.062500_g60692_i0 | PRJNA600413 | 61393 | 193 | 1.0625 | 2.050625 | Bythopirellula goksoeyrii | 1400387 | Bacteria | Bacteria | 335 | 1.48e-87 | NTclustered | gi|1727544988|gb|CP042913.1| | 1400387 | g60692 | i0 | 97.927 | 153.538860103627 | 193 | 4 | 100 | 0 | 1 | 193 | 5091483 | 5091291 | Bythopirellula goksoeyrii strain Pr1d chromosome | blastn | 29633 | 335 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Lacipirellulaceae | Bythopirellula | Bythopirellula goksoeyrii | |
| 15877949 | 15877949 | PRJNA600413_P_NODE_81713_length_179_cov_0.953846_g81012_i0 | PRJNA600413 | 81713 | 179 | 0.953846 | 1.70738434 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 134 | 5.2600000000000005e-27 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g81012 | i0 | 80.814 | 0.960893854748603 | 172 | 31 | 96 | 2 | 3 | 173 | 3310474 | 3310644 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 172 | 134 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 21544603 | 21544603 | PRJNA600413_P_NODE_88797_length_174_cov_1.880000_g88096_i0 | PRJNA600413 | 88797 | 174 | 1.88 | 3.2712 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 311 | 2.19e-80 | NTclustered | gi|164510706|emb|AJ966885.1| | 134634 | g88096 | i0 | 98.851 | 60.683908045977 | 174 | 2 | 100 | 0 | 1 | 174 | 3174 | 3347 | Opitutus sp. VeGlc2 16S rRNA gene (partial), 23S rRNA gene, tRNA-Ala gene, tRNA-Ile gene, ITS1 and ITS2, strain DSM 11246 | blastn | 10559 | 311 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. VeGlc2 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;