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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA600413" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA600413 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6951685 6951685 PRJNA600413_P_NODE_146986_length_161_cov_0.910714_g146285_i0 PRJNA600413 146986 161 0.910714 1.46624954 Candidatus Saccharimonas sp. 1917697 Bacteria Bacteria 281 1.57e-71   NTclustered gi|2070586293|gb|CP076101.2| 1917697 g146285 i0 98.137 1 161 3 100 0 1 161 443079 443239 MAG: Candidatus Saccharimonas sp. isolate JCVI_32_bin.49 chromosome, complete genome blastn 161 281 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
14601787 14601787 PRJNA600413_P_NODE_111472_length_166_cov_0.871795_g110771_i0 PRJNA600413 111472 166 0.871795 1.4471797 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 1619070 Bacteria Bacteria 124 2.9e-24   NTclustered gi|837350690|gb|CP011211.1| 1619070 g110771 i0 82.468 2.33734939759036 154 16 93 8 1 154 995143 995285 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome blastn 388 124 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
19699781 19699781 PRJNA600413_P_NODE_134396_length_163_cov_0.894737_g133695_i0 PRJNA600413 134396 163 0.894737 1.45842131 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 1619070 Bacteria Bacteria 158 2.8e-34   NTclustered gi|837350690|gb|CP011211.1| 1619070 g133695 i0 85.806 2.66871165644172 155 14 93 8 2 153 857420 857569 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome blastn 435 158 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
19700017 19700017 PRJNA600413_P_NODE_149576_length_161_cov_0.910714_g148875_i0 PRJNA600413 149576 161 0.910714 1.46624954 Candidatus Nanosynbacter lyticus 2093824 Bacteria Bacteria 265 1.5799999999999998e-66   NTclustered gi|2516688763|gb|CP124549.1| 2093824 g148875 i0 96.273 14 161 6 100 0 1 161 265084 264924 Candidatus Nanosynbacter lyticus strain ML1 chromosome, complete genome blastn 2254 265 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter lyticus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;