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contig_metadata

32 rows where analysis = "blastn", bioproject = "PRJNA599208" and tax_superkingdom = "Viruses"

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tax_kingdom 2

tax_superkingdom 1

  • Viruses · 32 ✖

bioproject 1

  • PRJNA599208 · 32 ✖

analysis 1

  • blastn · 32 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
572146 572146 PRJNA599208_P_NODE_10721_length_205_cov_1.833333_g10525_i0 PRJNA599208 10721 205 1.833333 3.75833265 Megareus marna-like virus 1 2980093 Viruses Viruses 145 2.8699999999999997e-30   NTclustered gi|2306601800|gb|OP191694.1| 2980093 g10525 i0 100 0.380487804878049 78 0 38 0 128 205 1195 1118 MAG: Megareus marna-like virus 1 isolate Nanocul1, partial genome blastn 78 145 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Marnaviridae   Megareus marna-like virus 1
572167 572167 PRJNA599208_P_NODE_12921_length_179_cov_1.633803_g12725_i0 PRJNA599208 12921 179 1.633803 2.92450737 Caudoviricetes sp. 2832643 Viruses Viruses 132 1.89e-26   NTclustered gi|2054454799|tpg|BK031399.1| 2832643 g12725 i0 84.173 0.776536312849162 139 18 77 3 41 177 13536 13400 MAG TPA_asm: Caudoviricetes sp. isolate ct2dy1, partial genome blastn 139 132 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
572194 572194 PRJNA599208_P_NODE_15501_length_158_cov_1.272727_g15305_i0 PRJNA599208 15501 158 1.272727 2.01090866 Seadornavirus kadipiroense 3241299 Viruses Viruses 292 7.07e-75   NTclustered gi|2083529935|tpd|BR001732.1| 104580 g15305 i0 100 1 158 0 100 0 1 158 447 290 TPA_asm: Kadipiro virus rat/2019/410 gene for VP12 protein, complete cds blastn 158 292 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Seadornavirus Seadornavirus kadipiroense
572226 572226 PRJNA599208_P_NODE_2521_length_563_cov_2.024715_g2338_i0 PRJNA599208 2521 563 2.024715 11.39914545 Seadornavirus kadipiroense 3241299 Viruses Viruses 1035 0   NTclustered gi|2083529915|tpd|BR001722.1| 104580 g2338 i0 99.822 4.23978685612789 563 1 100 0 1 563 2951 2389 TPA_asm: Kadipiro virus rat/2019/410 gene for VP2 protein, complete cds blastn 2387 1035 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Seadornavirus Seadornavirus kadipiroense
572237 572237 PRJNA599208_P_NODE_3321_length_475_cov_1.648402_g3127_i0 PRJNA599208 3321 475 1.648402 7.8299095 Seadornavirus kadipiroense 3241299 Viruses Viruses 878 0   NTclustered gi|2083529917|tpd|BR001723.1| 104580 g3127 i0 100 1 475 0 100 0 1 475 1857 1383 TPA_asm: Kadipiro virus rat/2019/395 gene for VP3 protein, partial cds blastn 475 878 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Seadornavirus Seadornavirus kadipiroense
1847957 1847957 PRJNA599208_P_NODE_15662_length_157_cov_0.966667_g15466_i0 PRJNA599208 15662 157 0.966667 1.51766719 Seadornavirus kadipiroense 3241299 Viruses Viruses 285 1.17e-72   NTclustered gi|2083529915|tpd|BR001722.1| 104580 g15466 i0 99.367 1.00636942675159 158 0 100 1 1 157 1089 1246 TPA_asm: Kadipiro virus rat/2019/410 gene for VP2 protein, complete cds blastn 158 285 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Seadornavirus Seadornavirus kadipiroense
3123162 3123162 PRJNA599208_P_NODE_16003_length_155_cov_0.974576_g15807_i0 PRJNA599208 16003 155 0.974576 1.5105928 Seadornavirus kadipiroense 3241299 Viruses Viruses 287 3.21e-73   NTclustered gi|2083529913|tpd|BR001721.1| 104580 g15807 i0 100 1.49032258064516 155 0 100 0 1 155 1420 1574 TPA_asm: Kadipiro virus rat/2019/410 RdRp gene for RNA-dependent RNA polymerase, partial cds blastn 231 287 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Seadornavirus Seadornavirus kadipiroense
3123254 3123254 PRJNA599208_P_NODE_8283_length_249_cov_2.669811_g8087_i0 PRJNA599208 8283 249 2.669811 6.64782939 Reagent-associated tombus-like virus 1 2875818 Viruses Viruses 433 6.89e-117   NTclustered gi|2094552980|gb|MZ824229.1| 2875818 g8087 i0 98.765 1.24899598393574 243 3 98 0 1 243 243 1 Reagent-associated tombus-like virus 1 isolate 3 replicase-like gene, partial sequence blastn 311 433 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Reagent-associated tombus-like virus 1
4399880 4399880 PRJNA599208_P_NODE_14424_length_166_cov_1.914729_g14228_i0 PRJNA599208 14424 166 1.914729 3.17845014 Reagent-associated tombus-like virus 4 2875821 Viruses Viruses 307 2.69e-79   NTclustered gi|2094552977|gb|MZ824226.1| 2875821 g14228 i0 100 1 166 0 100 0 1 166 374 539 Reagent-associated tombus-like virus 4 isolate 6 replicase-like gene, partial sequence blastn 166 307 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Reagent-associated tombus-like virus 4
4399969 4399969 PRJNA599208_P_NODE_7644_length_264_cov_2.215859_g7448_i0 PRJNA599208 7644 264 2.215859 5.84986776 Seadornavirus kadipiroense 3241299 Viruses Viruses 488 1.5499999999999999e-133   NTclustered gi|2083529929|tpd|BR001729.1| 104580 g7448 i0 100 1 264 0 100 0 1 264 590 327 TPA_asm: Kadipiro virus rat/2019/399 gene for VP9 protein, complete cds blastn 264 488 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Seadornavirus Seadornavirus kadipiroense
6950558 6950558 PRJNA599208_P_NODE_7946_length_256_cov_3.278539_g7750_i0 PRJNA599208 7946 256 3.278539 8.39305984 Seadornavirus kadipiroense 3241299 Viruses Viruses 473 4.189999999999999e-129   NTclustered gi|2083529917|tpd|BR001723.1| 104580 g7750 i0 100 1 256 0 100 0 1 256 1166 911 TPA_asm: Kadipiro virus rat/2019/395 gene for VP3 protein, partial cds blastn 256 473 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Seadornavirus Seadornavirus kadipiroense
6950569 6950569 PRJNA599208_P_NODE_8686_length_240_cov_1.724138_g8490_i0 PRJNA599208 8686 240 1.724138 4.1379312 Reagent-associated tombus-like virus 3 2875820 Viruses Viruses 307 4.17e-79   NTclustered gi|2094552978|gb|MZ824227.1| 2875820 g8490 i0 98.286 0.729166666666667 175 3 73 0 1 175 175 1 Reagent-associated tombus-like virus 3 isolate 5 replicase-like gene, partial sequence blastn 175 307 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Reagent-associated tombus-like virus 3
8225362 8225362 PRJNA599208_P_NODE_14527_length_165_cov_2.101562_g14331_i0 PRJNA599208 14527 165 2.101562 3.4675773 Seadornavirus kadipiroense 3241299 Viruses Viruses 305 9.59e-79   NTclustered gi|2083529921|tpd|BR001725.1| 104580 g14331 i0 100 2 165 0 100 0 1 165 834 670 TPA_asm: Kadipiro virus rat/2019/399 gene for VP5 protein, complete cds blastn 330 305 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Seadornavirus Seadornavirus kadipiroense
8225373 8225373 PRJNA599208_P_NODE_15087_length_161_cov_1.241935_g14891_i0 PRJNA599208 15087 161 1.241935 1.99951535 Seadornavirus kadipiroense 3241299 Viruses Viruses 298 1.56e-76   NTclustered gi|2083529915|tpd|BR001722.1| 104580 g14891 i0 100 1 161 0 100 0 1 161 1421 1581 TPA_asm: Kadipiro virus rat/2019/410 gene for VP2 protein, complete cds blastn 161 298 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Seadornavirus Seadornavirus kadipiroense
9500759 9500759 PRJNA599208_P_NODE_7648_length_264_cov_2.039648_g7452_i0 PRJNA599208 7648 264 2.039648 5.38467072 Seadornavirus kadipiroense 3241299 Viruses Viruses 488 1.5499999999999999e-133   NTclustered gi|2083529921|tpd|BR001725.1| 104580 g7452 i0 100 1 264 0 100 0 1 264 1827 1564 TPA_asm: Kadipiro virus rat/2019/399 gene for VP5 protein, complete cds blastn 264 488 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Seadornavirus Seadornavirus kadipiroense
10776475 10776475 PRJNA599208_P_NODE_13449_length_174_cov_1.795620_g13253_i0 PRJNA599208 13449 174 1.79562 3.1243788 Seadornavirus kadipiroense 3241299 Viruses Viruses 322 1.01e-83   NTclustered gi|2083529913|tpd|BR001721.1| 104580 g13253 i0 100 1 174 0 100 0 1 174 2110 1937 TPA_asm: Kadipiro virus rat/2019/410 RdRp gene for RNA-dependent RNA polymerase, partial cds blastn 174 322 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Seadornavirus Seadornavirus kadipiroense
12051320 12051320 PRJNA599208_P_NODE_10350_length_211_cov_1.114943_g10154_i0 PRJNA599208 10350 211 1.114943 2.35252973 Reagent-associated tombus-like virus 3 2875820 Viruses Viruses 379 7.489999999999999e-101   NTclustered gi|2094552978|gb|MZ824227.1| 2875820 g10154 i0 99.052 1 211 2 100 0 1 211 1281 1491 Reagent-associated tombus-like virus 3 isolate 5 replicase-like gene, partial sequence blastn 211 379 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Reagent-associated tombus-like virus 3
12051353 12051353 PRJNA599208_P_NODE_13830_length_171_cov_1.141791_g13634_i0 PRJNA599208 13830 171 1.141791 1.95246261 Reagent-associated tombus-like virus 3 2875820 Viruses Viruses 311 2.14e-80   NTclustered gi|2094552978|gb|MZ824227.1| 2875820 g13634 i0 99.415 1 171 1 100 0 1 171 803 973 Reagent-associated tombus-like virus 3 isolate 5 replicase-like gene, partial sequence blastn 171 311 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Reagent-associated tombus-like virus 3
12051368 12051368 PRJNA599208_P_NODE_15130_length_160_cov_2.764228_g14934_i0 PRJNA599208 15130 160 2.764228 4.4227648 Seadornavirus kadipiroense 3241299 Viruses Viruses 296 5.55e-76   NTclustered gi|2083529917|tpd|BR001723.1| 104580 g14934 i0 100 1.5125 160 0 100 0 1 160 535 376 TPA_asm: Kadipiro virus rat/2019/395 gene for VP3 protein, partial cds blastn 242 296 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Seadornavirus Seadornavirus kadipiroense
13326092 13326092 PRJNA599208_P_NODE_10111_length_214_cov_2.576271_g9915_i0 PRJNA599208 10111 214 2.576271 5.51321994 Seadornavirus kadipiroense 3241299 Viruses Viruses 390 3.519999999999999e-104   NTclustered gi|2083529913|tpd|BR001721.1| 104580 g9915 i0 99.533 2.99065420560748 214 1 100 0 1 214 945 1158 TPA_asm: Kadipiro virus rat/2019/410 RdRp gene for RNA-dependent RNA polymerase, partial cds blastn 640 390 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Seadornavirus Seadornavirus kadipiroense
13326151 13326151 PRJNA599208_P_NODE_14271_length_167_cov_2.123077_g14075_i0 PRJNA599208 14271 167 2.123077 3.54553859 Seadornavirus kadipiroense 3241299 Viruses Viruses 303 3.5e-78   NTclustered gi|2083529923|tpd|BR001726.1| 104580 g14075 i0 99.405 1.0059880239521 168 0 100 1 1 167 930 1097 TPA_asm: Kadipiro virus rat/2019/399 gene for VP6 protein, complete cds blastn 168 303 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Seadornavirus Seadornavirus kadipiroense
13326270 13326270 PRJNA599208_P_NODE_7471_length_269_cov_2.474138_g7275_i0 PRJNA599208 7471 269 2.474138 6.65543122 Seadornavirus kadipiroense 3241299 Viruses Viruses 497 2.63e-136   NTclustered gi|2083529913|tpd|BR001721.1| 104580 g7275 i0 100 1.24907063197026 269 0 100 0 1 269 278 546 TPA_asm: Kadipiro virus rat/2019/410 RdRp gene for RNA-dependent RNA polymerase, partial cds blastn 336 497 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Seadornavirus Seadornavirus kadipiroense
14601182 14601182 PRJNA599208_P_NODE_6692_length_292_cov_1.352941_g6496_i0 PRJNA599208 6692 292 1.352941 3.95058772 Reagent-associated tombus-like virus 1 2875818 Viruses Viruses 531 2.85e-146   NTclustered gi|2094552980|gb|MZ824229.1| 2875818 g6496 i0 99.655 0.993150684931507 290 1 99 0 1 290 480 769 Reagent-associated tombus-like virus 1 isolate 3 replicase-like gene, partial sequence blastn 290 531 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Reagent-associated tombus-like virus 1
15874946 15874946 PRJNA599208_P_NODE_14633_length_164_cov_2.118110_g14437_i0 PRJNA599208 14633 164 2.11811 3.4737004 Megareus marna-like virus 1 2980093 Viruses Viruses 303 3.42e-78   NTclustered gi|2306601800|gb|OP191694.1| 2980093 g14437 i0 100 1 164 0 100 0 1 164 77 240 MAG: Megareus marna-like virus 1 isolate Nanocul1, partial genome blastn 164 303 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Marnaviridae   Megareus marna-like virus 1
15874951 15874951 PRJNA599208_P_NODE_14913_length_162_cov_1.672000_g14717_i0 PRJNA599208 14913 162 1.672 2.70864 Blacklegged tick picorna-like virus 2 2080259 Viruses Viruses 294 2.03e-75   NTclustered gi|1338075549|gb|MG647770.1| 2080259 g14717 i0 99.383 2 162 1 100 0 1 162 1128 1289 Blacklegged tick picorna-like virus 2 isolate RTS-11.1 hypothetical protein gene, partial cds blastn 324 294 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Blacklegged tick picorna-like virus 2
15874955 15874955 PRJNA599208_P_NODE_15233_length_160_cov_1.227642_g15037_i0 PRJNA599208 15233 160 1.227642 1.9642272 Seadornavirus kadipiroense 3241299 Viruses Viruses 291 2.5799999999999998e-74   NTclustered gi|2083529921|tpd|BR001725.1| 104580 g15037 i0 99.375 1.475 160 1 100 0 1 160 1434 1275 TPA_asm: Kadipiro virus rat/2019/399 gene for VP5 protein, complete cds blastn 236 291 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Seadornavirus Seadornavirus kadipiroense
17149788 17149788 PRJNA599208_P_NODE_10654_length_206_cov_1.863905_g10458_i0 PRJNA599208 10654 206 1.863905 3.8396443 Reagent-associated tombus-like virus 4 2875821 Viruses Viruses 381 2.0199999999999994e-101   NTclustered gi|2094552977|gb|MZ824226.1| 2875821 g10458 i0 100 1 206 0 100 0 1 206 853 1058 Reagent-associated tombus-like virus 4 isolate 6 replicase-like gene, partial sequence blastn 206 381 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Reagent-associated tombus-like virus 4
18424253 18424253 PRJNA599208_P_NODE_6895_length_285_cov_2.645161_g6699_i0 PRJNA599208 6895 285 2.645161 7.53870885 Seadornavirus kadipiroense 3241299 Viruses Viruses 527 3.59e-145   NTclustered gi|2083529913|tpd|BR001721.1| 104580 g6699 i0 100 1 285 0 100 0 1 285 2517 2233 TPA_asm: Kadipiro virus rat/2019/410 RdRp gene for RNA-dependent RNA polymerase, partial cds blastn 285 527 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Seadornavirus Seadornavirus kadipiroense
19698658 19698658 PRJNA599208_P_NODE_10476_length_209_cov_1.203488_g10280_i0 PRJNA599208 10476 209 1.203488 2.51528992 Megareus marna-like virus 1 2980093 Viruses Viruses 387 4.42e-103   NTclustered gi|2306601800|gb|OP191694.1| 2980093 g10280 i0 100 1 209 0 100 0 1 209 643 435 MAG: Megareus marna-like virus 1 isolate Nanocul1, partial genome blastn 209 387 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Marnaviridae   Megareus marna-like virus 1
19698699 19698699 PRJNA599208_P_NODE_13656_length_172_cov_1.970370_g13460_i0 PRJNA599208 13656 172 1.97037 3.3890364 Crogonang virus 47 3063018 Viruses Viruses 241 2.87e-59   NTclustered gi|2626079445|gb|OR270332.1| 3063018 g13460 i0 91.908 2 173 12 100 2 1 172 171 342 MAG: Crogonang virus 47 isolate CGH03 genomic sequence blastn 344 241 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Crogonang virus 47
23524710 23524710 PRJNA599208_P_NODE_9699_length_221_cov_1.451087_g9503_i0 PRJNA599208 9699 221 1.451087 3.20690227 Seadornavirus kadipiroense 3241299 Viruses Viruses 409 1.0100000000000001e-109   NTclustered gi|2083529913|tpd|BR001721.1| 104580 g9503 i0 100 1.92307692307692 221 0 100 0 1 221 3128 2908 TPA_asm: Kadipiro virus rat/2019/410 RdRp gene for RNA-dependent RNA polymerase, partial cds blastn 425 409 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Seadornavirus Seadornavirus kadipiroense
23524711 23524711 PRJNA599208_P_NODE_9799_length_219_cov_2.214286_g9603_i0 PRJNA599208 9799 219 2.214286 4.84928634 Reagent-associated tombus-like virus 1 2875818 Viruses Viruses 405 1.29e-108   NTclustered gi|2094552980|gb|MZ824229.1| 2875818 g9603 i0 100 1 219 0 100 0 1 219 1147 929 Reagent-associated tombus-like virus 1 isolate 3 replicase-like gene, partial sequence blastn 219 405 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Reagent-associated tombus-like virus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;