RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA599208" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA599208 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
572146 572146 PRJNA599208_P_NODE_10721_length_205_cov_1.833333_g10525_i0 PRJNA599208 10721 205 1.833333 3.75833265 Megareus marna-like virus 1 2980093 Viruses Viruses 145 2.8699999999999997e-30   NTclustered gi|2306601800|gb|OP191694.1| 2980093 g10525 i0 100 0.380487804878049 78 0 38 0 128 205 1195 1118 MAG: Megareus marna-like virus 1 isolate Nanocul1, partial genome blastn 78 145 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Marnaviridae   Megareus marna-like virus 1
15874946 15874946 PRJNA599208_P_NODE_14633_length_164_cov_2.118110_g14437_i0 PRJNA599208 14633 164 2.11811 3.4737004 Megareus marna-like virus 1 2980093 Viruses Viruses 303 3.42e-78   NTclustered gi|2306601800|gb|OP191694.1| 2980093 g14437 i0 100 1 164 0 100 0 1 164 77 240 MAG: Megareus marna-like virus 1 isolate Nanocul1, partial genome blastn 164 303 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Marnaviridae   Megareus marna-like virus 1
15874951 15874951 PRJNA599208_P_NODE_14913_length_162_cov_1.672000_g14717_i0 PRJNA599208 14913 162 1.672 2.70864 Blacklegged tick picorna-like virus 2 2080259 Viruses Viruses 294 2.03e-75   NTclustered gi|1338075549|gb|MG647770.1| 2080259 g14717 i0 99.383 2 162 1 100 0 1 162 1128 1289 Blacklegged tick picorna-like virus 2 isolate RTS-11.1 hypothetical protein gene, partial cds blastn 324 294 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Blacklegged tick picorna-like virus 2
19698658 19698658 PRJNA599208_P_NODE_10476_length_209_cov_1.203488_g10280_i0 PRJNA599208 10476 209 1.203488 2.51528992 Megareus marna-like virus 1 2980093 Viruses Viruses 387 4.42e-103   NTclustered gi|2306601800|gb|OP191694.1| 2980093 g10280 i0 100 1 209 0 100 0 1 209 643 435 MAG: Megareus marna-like virus 1 isolate Nanocul1, partial genome blastn 209 387 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Marnaviridae   Megareus marna-like virus 1
19698699 19698699 PRJNA599208_P_NODE_13656_length_172_cov_1.970370_g13460_i0 PRJNA599208 13656 172 1.97037 3.3890364 Crogonang virus 47 3063018 Viruses Viruses 241 2.87e-59   NTclustered gi|2626079445|gb|OR270332.1| 3063018 g13460 i0 91.908 2 173 12 100 2 1 172 171 342 MAG: Crogonang virus 47 isolate CGH03 genomic sequence blastn 344 241 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Crogonang virus 47

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;