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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA599208" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA599208 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1848000 1848000 PRJNA599208_P_NODE_3462_length_462_cov_3.491765_g3268_i0 PRJNA599208 3462 462 3.491765 16.1319543 Pseudoloma neurophilia 146866 Fungi Fungi 845 0   NTclustered gi|11993647|gb|AF322654.1| 146866 g3268 i0 99.568 91.3246753246753 463 1 100 1 1 462 1476 1938 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 42192 845 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
4399963 4399963 PRJNA599208_P_NODE_7304_length_273_cov_2.805085_g7108_i0 PRJNA599208 7304 273 2.805085 7.65788205 Pseudoloma neurophilia 146866 Fungi Fungi 496 9.63e-136   NTclustered gi|11993647|gb|AF322654.1| 146866 g7108 i0 99.267 77.1501831501832 273 2 100 0 1 273 12 284 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 21062 496 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
9500656 9500656 PRJNA599208_P_NODE_14888_length_162_cov_2.136000_g14692_i0 PRJNA599208 14888 162 2.136 3.46032 Pleistophora mulleri 249366 Fungi Fungi 276 7.350000000000001e-70   NTclustered gi|134147422|gb|EF119339.1| 249366 g14692 i0 97.531 37.8148148148148 162 2 99 2 2 162 3071 2911 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 6126 276 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri
14601093 14601093 PRJNA599208_P_NODE_15312_length_159_cov_1.868852_g15116_i0 PRJNA599208 15312 159 1.868852 2.97147468 Pseudoloma neurophilia 146866 Fungi Fungi 294 1.98e-75   NTclustered gi|11993647|gb|AF322654.1| 146866 g15116 i0 100 99.748427672956 159 0 100 0 1 159 1041 883 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15860 294 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
14601138 14601138 PRJNA599208_P_NODE_3452_length_463_cov_2.042254_g3258_i0 PRJNA599208 3452 463 2.042254 9.45563602 Pleistophora mulleri 249366 Fungi Fungi 551 3.6399999999999985e-152   NTclustered gi|134147422|gb|EF119339.1| 249366 g3258 i0 88.646 32.0388768898488 458 44 98 8 6 460 1985 2437 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 14834 551 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri
15874905 15874905 PRJNA599208_P_NODE_11373_length_196_cov_1.484277_g11177_i0 PRJNA599208 11373 196 1.484277 2.90918292 Vavraia culicis 103449 Fungi Fungi 219 1.58e-52   NTclustered gi|667636757|ref|XR_552273.1| 948595 g11177 i0 87.368 1.97959183673469 190 24 97 0 1 190 2398 2587 Vavraia culicis subsp. floridensis 28S ribosomal RNA (VCUG_02832), partial rRNA blastn 388 219 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Vavraia Vavraia culicis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;