RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA599026" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA599026 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9500257 9500257 PRJNA599026_S_NODE_49668_length_168_cov_1.285714_g49212_i0 PRJNA599026 49668 168 1.285714 2.15999952 Spironucleus vortens 58336 Fornicata other_Eukaryota 228 2.179999999999999e-55   NTclustered gi|158973894|gb|EU099373.1| 58336 g49212 i0 91.975 4.32142857142857 162 13 96 0 7 168 845 684 Spironucleus vortens alpha-tubulin gene, complete cds blastn 726 228 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus vortens
20973669 20973669 PRJNA599026_S_NODE_1477_length_772_cov_2.438451_g1145_i0 PRJNA599026 1477 772 2.438451 18.82484172 Spironucleus vortens 58336 Fornicata other_Eukaryota 881 0   NTclustered gi|2522341|gb|U94406.1|SVU94406 58336 g1145 i0 87.747 38.589378238342 759 88 98 3 5 759 446 1203 Spironucleus vortens elongation factor-1 alpha gene, partial cds blastn 29791 881 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus vortens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;