RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA599026" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA599026 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5675161 5675161 PRJNA599026_S_NODE_13745_length_270_cov_0.923077_g13289_i0 PRJNA599026 13745 270 0.923077 2.4923079 Patiria miniata 46514 Echinodermata other_Eukaryota 56.5 0.002   NTclustered gi|1944836794|ref|XM_038191229.1| 46514 g13289 i0 100 0.111111111111111 30 0 11 0 64 93 2199 2170 PREDICTED: Patiria miniata cGMP-inhibited 3',5'-cyclic phosphodiesterase A-like (LOC119721247), mRNA blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
18423661 18423661 PRJNA599026_S_NODE_38635_length_184_cov_1.355556_g38179_i0 PRJNA599026 38635 184 1.355556 2.49422304 Anneissia japonica 1529436 Echinodermata other_Eukaryota 148 1.9499999999999999e-31   NTclustered gi|1826640317|ref|XM_033252309.1| 1529436 g38179 i0 81.667 23.3478260869565 180 31 97 2 6 184 705 527 PREDICTED: Anneissia japonica polyubiquitin-B-like (LOC117109862), mRNA blastn 4296 148 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;