RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA599026" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA599026 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5675548 5675548 PRJNA599026_S_NODE_47585_length_171_cov_0.754098_g47129_i0 PRJNA599026 47585 171 0.754098 1.28950758 Eunicella cavolini 317547 Cnidaria other_Eukaryota 63.9 6.62e-6   NTclustered gi|2918369535|emb|OZ237717.1| 317547 g47129 i0 89.796 2.21052631578947 49 5 33 0 56 104 39888472 39888424 Eunicella cavolini genome assembly, chromosome: 1 blastn 378 63.9 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
6949727 6949727 PRJNA599026_S_NODE_20666_length_230_cov_1.596685_g20210_i0 PRJNA599026 20666 230 1.596685 3.6723755 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 52.8 0.021   NTclustered gi|2519014114|ref|XM_057458451.1| 13093 g20210 i0 100 0.243478260869565 28 0 12 0 84 111 290 263 PREDICTED: Hydractinia symbiolongicarpus ATP-dependent DNA helicase DDX11-like (LOC130655672), transcript variant X1, mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
8224650 8224650 PRJNA599026_S_NODE_20507_length_231_cov_1.087912_g20051_i0 PRJNA599026 20507 231 1.087912 2.51307672 Sphaerospora angulata 1232752 Cnidaria other_Eukaryota 150 7.109999999999999e-32   NTclustered gi|444437440|gb|JX286637.1| 1232752 g20051 i0 84.667 1.07359307359307 150 23 65 0 82 231 171 22 Sphaerospora angulata isolate 4K2/01032011 elongation factor 2 (EF2) gene, partial cds blastn 248 150 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Sphaerosporidae Sphaerospora Sphaerospora angulata
14600262 14600262 PRJNA599026_S_NODE_1112_length_880_cov_13.956679_g825_i0 PRJNA599026 1112 880 13.956679 122.8187752 Exaiptasia diaphana 2652724 Cnidaria other_Eukaryota 54.7 0.025   NTclustered gi|1191051559|ref|XM_021047964.1| 2652724 g825 i0 100 0.0329545454545455 29 0 3 0 554 582 3818 3846 PREDICTED: Exaiptasia diaphana monocarboxylate transporter 10 (LOC110242031), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Aiptasiidae Exaiptasia Exaiptasia diaphana
25367588 25367588 PRJNA599026_S_NODE_38900_length_183_cov_22.276119_g38444_i0 PRJNA599026 38900 183 22.276119 40.76529777 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 209 8.74e-50   NTclustered gi|2812095675|ref|XR_011129204.1| 246305 g38444 i0 91.447 19.5737704918033 152 13 83 0 3 154 12907 13058 PREDICTED: Montipora capricornis uncharacterized lncRNA (LOC138034778), ncRNA blastn 3582 209 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Montipora Montipora capricornis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;