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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA599026" and tax_kingdom = "Fusobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Fusobacteriati · 7 ✖

bioproject 1

  • PRJNA599026 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6245020 6245020 PRJNA599026_S_NODE_65265_length_163_cov_0.885965_g64809_i0 PRJNA599026 65265 163 0.885965 1.44412295 Leptotrichia 32067 Bacteria Bacteria 291 2.64e-74   NTclustered gi|1708575239|dbj|AP019834.1| 157687 g64809 i0 100 8.70552147239264 157 0 96 0 1 157 1985220 1985376 Leptotrichia wadei JMUB3933 DNA, complete genome blastn 1419 291 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia wadei
8224993 8224993 PRJNA599026_S_NODE_51447_length_167_cov_0.864407_g50991_i0 PRJNA599026 51447 167 0.864407 1.44355969 Leptotrichia shahii 157691 Bacteria Bacteria 303 3.5e-78   NTclustered gi|1708568515|dbj|AP019827.1| 157691 g50991 i0 99.401 11 167 1 100 0 1 167 1010462 1010628 Leptotrichia shahii JCM16776 DNA, complete genome blastn 1837 303 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia shahii
12051041 12051041 PRJNA599026_S_NODE_54210_length_166_cov_0.871795_g53754_i0 PRJNA599026 54210 166 0.871795 1.4471797 Cetobacterium somerae 188913 Bacteria Bacteria 169 1.32e-37   NTclustered gi|2666488225|gb|CP143319.1| 188913 g53754 i0 87.248 1.81325301204819 149 17 89 1 1 147 1352645 1352793 Cetobacterium somerae strain ceto chromosome, complete genome blastn 301 169 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
14600536 14600536 PRJNA599026_S_NODE_34692_length_191_cov_1.838028_g34236_i0 PRJNA599026 34692 191 1.838028 3.51063348 Cetobacterium somerae 188913 Bacteria Bacteria 315 1.9e-81   NTclustered gi|2201062197|gb|CP092519.1| 188913 g34236 i0 96.335 16.020942408377 191 7 100 0 1 191 384952 384762 Cetobacterium somerae strain CS2105-BJ chromosome, complete genome blastn 3060 315 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
17719249 17719249 PRJNA599026_S_NODE_8834_length_326_cov_2.425993_g8378_i0 PRJNA599026 8834 326 2.425993 7.90873718 Cetobacterium 180162 Bacteria Bacteria 442 1.5599999999999995e-119   NTclustered gi|2865366169|gb|CP122292.1| 188913 g8378 i0 91.104 95.7177914110429 326 29 100 0 1 326 346470 346145 Cetobacterium somerae strain MSU41 chromosome, complete genome blastn 31204 442 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
19698460 19698460 PRJNA599026_S_NODE_60076_length_164_cov_0.886957_g59620_i0 PRJNA599026 60076 164 0.886957 1.45460948 Leptotrichia buccalis 40542 Bacteria Bacteria 298 1.59e-76   NTclustered gi|257048753|gb|CP001685.1| 523794 g59620 i0 99.39 1 164 1 100 0 1 164 401343 401180 Leptotrichia buccalis DSM 1135, complete genome blastn 164 298 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia buccalis
19698600 19698600 PRJNA599026_S_NODE_70136_length_161_cov_0.910714_g69680_i0 PRJNA599026 70136 161 0.910714 1.46624954 Leptotrichia wadei 157687 Bacteria Bacteria 298 1.56e-76   NTclustered gi|1708582457|dbj|AP019841.1| 157687 g69680 i0 100 1 161 0 100 0 1 161 228957 228797 Leptotrichia wadei JMUB3936 DNA, complete genome blastn 161 298 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia wadei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;