RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA599026" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 7 ✖

bioproject 1

  • PRJNA599026 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2416716 2416716 PRJNA599026_S_NODE_69782_length_161_cov_0.910714_g69326_i0 PRJNA599026 69782 161 0.910714 1.46624954 Trypanosoma 5690 Euglenozoa other_Eukaryota 87.9 3.67e-13   NTclustered gi|150026606|gb|EF457295.1| 449968 g69326 i0 88 38.2049689440994 75 7 47 2 1 75 196 124 Trypanosoma sp. 364 18S ribosomal RNA gene, partial sequence blastn 6151 87.9 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma sp. 364
5675132 5675132 PRJNA599026_S_NODE_10305_length_305_cov_1.593750_g9849_i0 PRJNA599026 10305 305 1.59375 4.8609375 Trypanosoma cruzi 5693 Euglenozoa other_Eukaryota 479 1.1e-130   NTclustered gi|1031970241|gb|CP015675.1| 85057 g9849 i0 95.098 117.881967213115 306 12 99 3 2 305 437683 437379 Trypanosoma cruzi cruzi strain Sylvio X10/cl1 chromosome TcI25, partial sequence blastn 35954 479 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
5675861 5675861 PRJNA599026_S_NODE_9025_length_323_cov_1.649635_g8569_i0 PRJNA599026 9025 323 1.649635 5.32832105 Leishmania major 5664 Euglenozoa other_Eukaryota 117 1.06e-21   NTclustered gi|2728023139|pdb|8OVJ|5 347515 g8569 i0 95.833 22.4365325077399 72 3 22 0 252 323 3 74 Chain 5, SR4_chain_5 blastn 7247 117 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania major
11344661 11344661 PRJNA599026_S_NODE_5929_length_392_cov_2.411079_g5473_i0 PRJNA599026 5929 392 2.411079 9.45142968 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 62.1 6.23e-5   NTclustered gi|1673144688|ref|XM_029375141.1| 83891 g5473 i0 97.222 0.454081632653061 36 1 9 0 286 321 144 109 Trypanosoma conorhini centrin (Tco025E_08287), partial mRNA blastn 178 62.1 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma conorhini
12051089 12051089 PRJNA599026_S_NODE_57630_length_165_cov_0.879310_g57174_i0 PRJNA599026 57630 165 0.87931 1.4508615 Leishmania martiniquensis 1580590 Euglenozoa other_Eukaryota 86.1 1.36e-12   NTclustered gi|2787685306|ref|XM_067319584.1| 1580590 g57174 i0 83.333 0.581818181818182 96 12 57 4 70 163 1616 1523 Leishmania martiniquensis uncharacterized protein (LSCM1_01989), partial mRNA blastn 96 86.1 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania martiniquensis
13325900 13325900 PRJNA599026_S_NODE_60471_length_164_cov_0.886957_g60015_i0 PRJNA599026 60471 164 0.886957 1.45460948 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 56.5 0.001   NTclustered gi|290979697|ref|XM_002672524.1| 5762 g60015 i0 100 0.182926829268293 30 0 18 0 135 164 996 967 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_59159), mRNA blastn 30 56.5 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
18423816 18423816 PRJNA599026_S_NODE_52555_length_167_cov_0.864407_g52099_i0 PRJNA599026 52555 167 0.864407 1.44355969 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 137 3.76e-28   NTclustered gi|290979815|ref|XM_002672583.1| 5762 g52099 i0 82.036 1 167 24 100 3 1 167 320 480 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_59183), mRNA blastn 167 137 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;