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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA597223" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 5 ✖

tax_phylum 1

tax_clade 1

bioproject 1

  • PRJNA597223 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
569447 569447 PRJNA597223_P_NODE_73881_length_165_cov_1.938462_g72035_i0 PRJNA597223 73881 165 1.938462 3.1984623 uncultured Nanobdellati archaeon 2219213 Archaea Archaea 52.8 0.014   NTclustered gi|1572541194|emb|LR135917.1| 2219213 g72035 i0 100 0.16969696969697 28 0 17 0 58 85 73570 73597 uncultured DPANN archaeon genomic DNA containing deoA-rbcL-e2b2 region region blastn 28 52.8 1 Archaea   Nanobdellati           uncultured Nanobdellati archaeon
10773399 10773399 PRJNA597223_P_NODE_40469_length_224_cov_3.698413_g38623_i0 PRJNA597223 40469 224 3.698413 8.2844451200000009 uncultured archaeon 115547 Archaea Archaea 313 8.27e-81   NTclustered gi|1032564179|gb|KX029975.1| 115547 g38623 i0 98.857 4.20982142857143 175 2 78 0 8 182 76 250 Uncultured archaeon clone A_OTU_499 16S ribosomal RNA gene, partial sequence blastn 943 313 1 Archaea               uncultured archaeon
16443360 16443360 PRJNA597223_P_NODE_16993_length_401_cov_2.983607_g15181_i0 PRJNA597223 16993 401 2.983607 11.96426407 root 1 Root_unresolved Root_unresolved 440 7.019999999999997e-119   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g15181 i0 96.283 65.6359102244389 269 9 67 1 20 287 3123927 3124195 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 26320 440 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
17718716 17718716 PRJNA597223_P_NODE_87434_length_151_cov_1.275862_g85588_i0 PRJNA597223 87434 151 1.275862 1.92655162 Methanothrix 2222 Archaea Archaea 276 6.72e-70   NTclustered gi|507148322|ref|NR_103125.1| 2223 g85588 i0 100 49.7814569536424 149 0 99 0 2 150 2852 2704 Methanosaeta concilii strain GP6 23S ribosomal RNA gene, complete sequence blastn 7517 276 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix soehngenii
18420766 18420766 PRJNA597223_P_NODE_17095_length_399_cov_7279.043956_g15283_i0 PRJNA597223 17095 399 7279.043956 29043.38538444 uncultured Methanoregula sp. 1005933 Archaea Archaea 693 0   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g15283 i0 97.995 287.749373433584 399 8 100 0 1 399 3117499 3117101 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 114812 693 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;