contig_metadata
20 rows where analysis = "blastn", bioproject = "PRJNA597223" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1845227 | 1845227 | PRJNA597223_P_NODE_82742_length_155_cov_1.200000_g80896_i0 | PRJNA597223 | 82742 | 155 | 1.2 | 1.86 | Chthoniobacter flavus | 191863 | Bacteria | Bacteria | 213 | 5.52e-51 | NTclustered | gi|183579828|emb|AM905425.1| | 497964 | g80896 | i0 | 91.558 | 31.9677419354839 | 154 | 13 | 99 | 0 | 1 | 154 | 2116 | 1963 | Chthoniobacter flavus 23S rRNA gene, strain Ellin428 | blastn | 4955 | 213 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacter | Chthoniobacter flavus | |
| 3119844 | 3119844 | PRJNA597223_P_NODE_1723_length_1285_cov_9.685600_g1110_i0 | PRJNA597223 | 1723 | 1285 | 9.6856 | 124.45996 | Pedosphaera parvula | 1032527 | Bacteria | Bacteria | 1304 | 0 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g1110 | i0 | 86.026 | 121.275486381323 | 1238 | 147 | 95 | 24 | 60 | 1285 | 421 | 1644 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 155839 | 1304 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 3120370 | 3120370 | PRJNA597223_P_NODE_67083_length_175_cov_2.657143_g65237_i0 | PRJNA597223 | 67083 | 175 | 2.657143 | 4.65000025 | Lacunisphaera limnophila | 1838286 | Bacteria | Bacteria | 313 | 6.13e-81 | NTclustered | gi|1070531674|gb|CP016094.1| | 1838286 | g65237 | i0 | 98.857 | 36.0514285714286 | 175 | 2 | 100 | 0 | 1 | 175 | 2558573 | 2558399 | Lacunisphaera limnophila strain IG16b, complete genome | blastn | 6309 | 313 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Lacunisphaera | Lacunisphaera limnophila | |
| 4396574 | 4396574 | PRJNA597223_P_NODE_29044_length_282_cov_2.012146_g27198_i0 | PRJNA597223 | 29044 | 282 | 2.012146 | 5.67425172 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 457 | 4.72e-124 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g27198 | i0 | 96.39 | 40.790780141844 | 277 | 10 | 98 | 0 | 1 | 277 | 5153112 | 5152836 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 11503 | 457 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 4396863 | 4396863 | PRJNA597223_P_NODE_5384_length_752_cov_3.316597_g4121_i0 | PRJNA597223 | 5384 | 752 | 3.316597 | 24.94080944 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 102 | 7.38e-17 | NTclustered | gi|29372944|gb|AY226274.1| | 156588 | g4121 | i0 | 92.958 | 9.29255319148936 | 71 | 4 | 9 | 1 | 344 | 414 | 106 | 175 | Uncultured Verrucomicrobia bacterium clone BBBB-96 16S ribosomal RNA gene, partial sequence | blastn | 6988 | 102 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 4397229 | 4397229 | PRJNA597223_P_NODE_8724_length_589_cov_4.608303_g7161_i0 | PRJNA597223 | 8724 | 589 | 4.608303 | 27.14290467 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 802 | 0 | NTclustered | gi|226525317|gb|FJ872374.1| | 156588 | g7161 | i0 | 91.246 | 192.089983022071 | 594 | 45 | 100 | 7 | 1 | 589 | 2974 | 2383 | Uncultured Verrucomicrobia bacterium clone 184 genomic sequence | blastn | 113141 | 802 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 5672669 | 5672669 | PRJNA597223_P_NODE_21285_length_347_cov_3.660256_g19447_i0 | PRJNA597223 | 21285 | 347 | 3.660256 | 12.70108832 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 383 | 1.0299999999999998e-101 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g19447 | i0 | 86.994 | 84.492795389049 | 346 | 38 | 98 | 5 | 9 | 347 | 1315673 | 1315328 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 29319 | 383 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 5672709 | 5672709 | PRJNA597223_P_NODE_24965_length_312_cov_78.519856_g23121_i0 | PRJNA597223 | 24965 | 312 | 78.519856 | 244.98195072 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 499 | 8.67e-137 | NTclustered | gi|2874254019|emb|OY970344.1| | 412056 | g23121 | i0 | 96.078 | 137.673076923077 | 306 | 12 | 98 | 0 | 7 | 312 | 736152 | 736457 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.c.3 genome assembly, chromosome: 1 | blastn | 42954 | 499 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 6947289 | 6947289 | PRJNA597223_P_NODE_37986_length_234_cov_1.984925_g36140_i0 | PRJNA597223 | 37986 | 234 | 1.984925 | 4.6447245 | Opitutus sp. VeGlc2 | 134634 | Bacteria | Bacteria | 396 | 8.4e-106 | NTclustered | gi|164510706|emb|AJ966885.1| | 134634 | g36140 | i0 | 97.425 | 42.4615384615385 | 233 | 5 | 99 | 1 | 2 | 234 | 2339 | 2108 | Opitutus sp. VeGlc2 16S rRNA gene (partial), 23S rRNA gene, tRNA-Ala gene, tRNA-Ile gene, ITS1 and ITS2, strain DSM 11246 | blastn | 9936 | 396 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. VeGlc2 | |
| 10773424 | 10773424 | PRJNA597223_P_NODE_4289_length_842_cov_17.710037_g3177_i0 | PRJNA597223 | 4289 | 842 | 17.710037 | 149.11851154 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 830 | 0 | NTclustered | gi|2874253779|emb|OY969763.1| | 412056 | g3177 | i0 | 84.831 | 105.823040380048 | 857 | 95 | 99 | 24 | 1 | 838 | 3832760 | 3833600 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 | blastn | 89103 | 830 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 11344084 | 11344084 | PRJNA597223_P_NODE_50929_length_195_cov_2.600000_g49083_i0 | PRJNA597223 | 50929 | 195 | 2.6 | 5.07 | Verrucomicrobiales | 48461 | Bacteria | Bacteria | 305 | 1.17e-78 | NTclustered | gi|2022020957|gb|CP059069.1| | 2562705 | g49083 | i0 | 94.872 | 287.994871794872 | 195 | 10 | 100 | 0 | 1 | 195 | 3413010 | 3412816 | Akkermansiaceae bacterium strain AJA081-3 chromosome, complete genome | blastn | 56159 | 305 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansiaceae bacterium | ||
| 13322777 | 13322777 | PRJNA597223_P_NODE_18071_length_386_cov_2.299145_g16250_i0 | PRJNA597223 | 18071 | 386 | 2.299145 | 8.8746997 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 342 | 1.95e-89 | NTclustered | gi|2621704341|emb|OY760937.1| | 2499141 | g16250 | i0 | 91.27 | 79.1735751295337 | 252 | 20 | 65 | 2 | 135 | 386 | 3992475 | 3992226 | MAG: Verrucomicrobiae bacterium isolate 066a7682-a1ac-48de-8761-1470dc9e5c3e genome assembly, chromosome: 1 | blastn | 30561 | 342 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 13323534 | 13323534 | PRJNA597223_P_NODE_9411_length_566_cov_30.555556_g7801_i0 | PRJNA597223 | 9411 | 566 | 30.555556 | 172.94444696 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 889 | 0 | NTclustered | gi|2874254019|emb|OY970344.1| | 412056 | g7801 | i0 | 95.993 | 101.28445229682 | 549 | 18 | 97 | 3 | 1 | 548 | 736424 | 736969 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.c.3 genome assembly, chromosome: 1 | blastn | 57327 | 889 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 17147013 | 17147013 | PRJNA597223_P_NODE_63534_length_182_cov_1.360544_g61688_i0 | PRJNA597223 | 63534 | 182 | 1.360544 | 2.47619008 | Rubellicoccus peritrichatus | 3080537 | Bacteria | Bacteria | 99 | 1.96e-16 | NTclustered | gi|2605121622|gb|CP136920.1| | 3080537 | g61688 | i0 | 90.667 | 60.3846153846154 | 75 | 5 | 41 | 2 | 1 | 74 | 2162624 | 2162551 | Rubellicoccus peritrichatus strain CR14 isolate coral tank chromosome, complete genome | blastn | 10990 | 99 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Puniceicoccales | Cerasicoccaceae | Rubellicoccus | Rubellicoccus peritrichatus | |
| 17718594 | 17718594 | PRJNA597223_P_NODE_54554_length_189_cov_2.954545_g52708_i0 | PRJNA597223 | 54554 | 189 | 2.954545 | 5.58409005 | root | 1 | Root_unresolved | Root_unresolved | 135 | 1.57e-27 | NTclustered | gi|164510706|emb|AJ966885.1| | 134634 | g52708 | i0 | 100 | 21.8201058201058 | 73 | 0 | 89 | 0 | 115 | 187 | 973 | 901 | Opitutus sp. VeGlc2 16S rRNA gene (partial), 23S rRNA gene, tRNA-Ala gene, tRNA-Ile gene, ITS1 and ITS2, strain DSM 11246 | blastn | 4124 | 135 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. VeGlc2 | |
| 21542610 | 21542610 | PRJNA597223_P_NODE_50477_length_196_cov_2.826087_g48631_i0 | PRJNA597223 | 50477 | 196 | 2.826087 | 5.53913052 | Akkermansia | 239934 | Bacteria | Bacteria | 143 | 9.779999999999999e-30 | NTclustered | gi|1888387165|gb|CP058562.1| | 239935 | g48631 | i0 | 90.09 | 167.632653061224 | 111 | 9 | 56 | 2 | 52 | 160 | 139780 | 139890 | Akkermansia muciniphila strain AK32 chromosome, complete genome | blastn | 32856 | 143 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 22246242 | 22246242 | PRJNA597223_P_NODE_43618_length_214_cov_2.229050_g41772_i0 | PRJNA597223 | 43618 | 214 | 2.22905 | 4.770167 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 298 | 2.19e-76 | NTclustered | gi|2874253768|emb|OY969715.1| | 412056 | g41772 | i0 | 93.5 | 8.52803738317757 | 200 | 13 | 93 | 0 | 15 | 214 | 915039 | 914840 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD01916.bin.1.1 genome assembly, chromosome: 1 | blastn | 1825 | 298 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 23521832 | 23521832 | PRJNA597223_P_NODE_77779_length_160_cov_2.280000_g75933_i0 | PRJNA597223 | 77779 | 160 | 2.28 | 3.648 | Termitidicoccus mucosus | 1184151 | Bacteria | Bacteria | 195 | 2.08e-45 | NTclustered | gi|2724066732|gb|CP109796.1| | 1184151 | g75933 | i0 | 89.61 | 33.325 | 154 | 14 | 96 | 2 | 7 | 159 | 5636712 | 5636864 | Termitidicoccus mucosus strain TSB47 chromosome, complete genome | blastn | 5332 | 195 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Termitidicoccus | Termitidicoccus mucosus | |
| 25366947 | 25366947 | PRJNA597223_P_NODE_12280_length_487_cov_4.780973_g10542_i0 | PRJNA597223 | 12280 | 487 | 4.780973 | 23.28333851 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 634 | 3.709999999999999e-177 | NTclustered | gi|2874254096|emb|OY970179.1| | 412056 | g10542 | i0 | 90.144 | 189.094455852156 | 487 | 48 | 100 | 0 | 1 | 487 | 1728872 | 1728386 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 | blastn | 92089 | 638 | 0.993730407523511 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 25366996 | 25366996 | PRJNA597223_P_NODE_33660_length_254_cov_1.881279_g31814_i0 | PRJNA597223 | 33660 | 254 | 1.881279 | 4.77844866 | Bacteria | 2 | Bacteria | Bacteria | 99 | 2.92e-16 | NTclustered | gi|1070531674|gb|CP016094.1| | 1838286 | g31814 | i0 | 90.541 | 10.0196850393701 | 74 | 7 | 29 | 0 | 24 | 97 | 546560 | 546633 | Lacunisphaera limnophila strain IG16b, complete genome | blastn | 2545 | 99 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Lacunisphaera | Lacunisphaera limnophila |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;