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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA597223" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 14 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA597223 · 14 ✖

analysis 1

  • blastn · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1140655 1140655 PRJNA597223_P_NODE_32161_length_262_cov_1.920705_g30315_i0 PRJNA597223 32161 262 1.920705 5.0322471 Metazoa 33208 Mollusca Mollusca 52.8 0.024   NTclustered gi|2427390617|ref|XM_052917999.1| 6604 g30315 i0 100 1.6793893129771 28 0 11 0 177 204 5153 5126 PREDICTED: Mya arenaria protein mono-ADP-ribosyltransferase PARP14-like (LOC128212513), mRNA blastn 440 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
3120389 3120389 PRJNA597223_P_NODE_68803_length_172_cov_4.094891_g66957_i0 PRJNA597223 68803 172 4.094891 7.04321252 Bradybaena similaris 145626 Mollusca Mollusca 54.7 0.004   NTclustered gi|2912984370|dbj|AP039589.1| 145626 g66957 i0 100 0.168604651162791 29 0 17 0 102 130 69685356 69685384 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 8, sequence blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
6947467 6947467 PRJNA597223_P_NODE_51566_length_194_cov_1.911950_g49720_i0 PRJNA597223 51566 194 1.91195 3.709183 Dreissena polymorpha 45954 Mollusca Mollusca 52.8 0.017   NTclustered gi|2364408178|ref|XM_052412926.1| 45954 g49720 i0 100 0.144329896907216 28 0 14 0 87 114 143 170 PREDICTED: Dreissena polymorpha uncharacterized LOC127870294 (LOC127870294), transcript variant X1, mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
6947900 6947900 PRJNA597223_S_NODE_2846_length_184_cov_1.551724_g2789_i0 PRJNA597223 2846 184 1.551724 2.85517216 Anadara broughtonii 148819 Mollusca Mollusca 54.7 0.004   NTclustered gi|2170965484|dbj|LC593126.1| 148819 g2789 i0 100 0.157608695652174 29 0 16 0 1 29 31 59 Anadara broughtonii GnRH mRNA for gonadotropin releasing hormone, complete cds blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Arcoida Arcidae Anadara Anadara broughtonii
8222020 8222020 PRJNA597223_P_NODE_14587_length_441_cov_5.396552_g12799_i0 PRJNA597223 14587 441 5.396552 23.79879432 Physella acuta 109671 Mollusca Mollusca 798 0   NTclustered gi|2572452079|ref|XR_009385380.1| 109671 g12799 i0 99.32 4.34920634920635 441 3 100 0 1 441 3767 3327 PREDICTED: Physella acuta large subunit ribosomal RNA (LOC131933988), rRNA blastn 1918 798 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta
8222202 8222202 PRJNA597223_P_NODE_29887_length_276_cov_2.954357_g28041_i0 PRJNA597223 29887 276 2.954357 8.15402532 Ctena cf. galapagana NHMUK 20210086 2892552 Mollusca Mollusca 139 1.8899999999999999e-28   NTclustered gi|2129023951|gb|OL361786.1| 2892552 g28041 i0 92.708 6.75 96 7 35 0 3 98 4148 4053 Ctena cf. galapagana NHMUK 20210086 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1863 139 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Lucinida Lucinidae Ctena Ctena cf. galapagana NHMUK 20210086
9497811 9497811 PRJNA597223_P_NODE_69348_length_172_cov_1.087591_g67502_i0 PRJNA597223 69348 172 1.087591 1.87065652 Bradybaena similaris 145626 Mollusca Mollusca 58.4 3.1e-4   NTclustered gi|2912985489|dbj|AP039590.1| 145626 g67502 i0 100 0.180232558139535 31 0 18 0 11 41 51611393 51611363 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 9, sequence blastn 31 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
10069352 10069352 PRJNA597223_P_NODE_55568_length_189_cov_1.597403_g53722_i0 PRJNA597223 55568 189 1.597403 3.01909167 Metazoa 33208 Mollusca Mollusca 348 1.85e-91   NTclustered gi|2572452079|ref|XR_009385380.1| 109671 g53722 i0 100 53.3492063492063 188 0 99 0 1 188 1576 1763 PREDICTED: Physella acuta large subunit ribosomal RNA (LOC131933988), rRNA blastn 10083 348 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta
10773655 10773655 PRJNA597223_P_NODE_64049_length_181_cov_1.506849_g62203_i0 PRJNA597223 64049 181 1.506849 2.72739669 Bradybaena similaris 145626 Mollusca Mollusca 56.5 0.001   NTclustered gi|2912997258|dbj|AP039602.1| 145626 g62203 i0 100 0.165745856353591 30 0 17 0 64 93 24530858 24530829 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 21, sequence blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
13323024 13323024 PRJNA597223_P_NODE_42171_length_219_cov_1.532609_g40325_i0 PRJNA597223 42171 219 1.532609 3.35641371 Ruditapes philippinarum 129788 Mollusca Mollusca 56.5 0.001   NTclustered gi|2616463935|ref|XM_060695927.1| 129788 g40325 i0 100 0.136986301369863 30 0 14 0 13 42 2709 2680 PREDICTED: Ruditapes philippinarum trichohyalin-like (LOC132713227), transcript variant X27, mRNA blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Ruditapes Ruditapes philippinarum
15168747 15168747 PRJNA597223_P_NODE_12452_length_483_cov_69.502232_g10712_i0 PRJNA597223 12452 483 69.502232 335.69578056 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 62.1 7.82e-5   NTclustered gi|2693871861|ref|XR_010104559.1| 6551 g10712 i0 95 7.69772256728778 40 1 8 1 442 480 3324 3285 PREDICTED: Mytilus trossulus large subunit ribosomal RNA (LOC134702777), rRNA blastn 3718 62.1 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus trossulus
17147006 17147006 PRJNA597223_P_NODE_62974_length_183_cov_1.506757_g61128_i0 PRJNA597223 62974 183 1.506757 2.75736531 Sinonovacula constricta 98310 Mollusca Mollusca 52.8 0.016   NTclustered gi|937961735|gb|KR534869.1| 98310 g61128 i0 100 0.153005464480874 28 0 15 0 1 28 5 32 Sinonovacula constricta insulin-like peptide 1 mRNA, complete cds blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Cardiida Solecurtidae Sinonovacula Sinonovacula constricta
20267377 20267377 PRJNA597223_S_NODE_3276_length_175_cov_1.963235_g3219_i0 PRJNA597223 3276 175 1.963235 3.43566125 root 1 Root_unresolved Root_unresolved 52.8 0.015   NTclustered gi|2170965484|dbj|LC593126.1| 148819 g3219 i0 100 0.32 28 0 16 0 1 28 30 57 Anadara broughtonii GnRH mRNA for gonadotropin releasing hormone, complete cds blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Arcoida Arcidae Anadara Anadara broughtonii
22246103 22246103 PRJNA597223_P_NODE_30818_length_270_cov_2.617021_g28972_i0 PRJNA597223 30818 270 2.617021 7.0659567 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.025   NTclustered gi|2913000417|dbj|AP039607.1| 145626 g28972 i0 100 0.103703703703704 28 0 10 0 128 155 22185803 22185830 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 26, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;