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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA597223" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA597223 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5673151 5673151 PRJNA597223_P_NODE_67025_length_175_cov_3.335714_g65179_i0 PRJNA597223 67025 175 3.335714 5.8374995 Gromochytrium mamkaevae 1486924 Fungi Fungi 87.9 4.04e-13   NTclustered gi|612507318|gb|KF586842.1| 1486924 g65179 i0 96.226 9.53714285714286 53 2 30 0 2 54 6181 6129 Gromochytrium mamkaevae strain CALU x-51 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1669 87.9 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Gromochytriales Gromochytriaceae Gromochytrium Gromochytrium mamkaevae
8222567 8222567 PRJNA597223_P_NODE_65327_length_178_cov_3.342657_g63481_i0 PRJNA597223 65327 178 3.342657 5.94992946 Powellomycetaceae sp. 2750442 Fungi Fungi 252 1.38e-62   NTclustered gi|1866582655|gb|MT730830.1| 2750442 g63481 i0 92.135 22.9438202247191 178 14 100 0 1 178 4547 4724 Powellomycetaceae sp. isolate JEL0819 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 4084 252 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae   Powellomycetaceae sp.
20971458 20971458 PRJNA597223_P_NODE_49077_length_199_cov_3.182927_g47231_i0 PRJNA597223 49077 199 3.182927 6.33402473 Spizellomyces punctatus 109760 Fungi Fungi 198 2.1e-46   NTclustered gi|1027029543|ref|XR_001677161.1| 645134 g47231 i0 96.639 34.4723618090452 119 4 60 0 81 199 4033 3915 Spizellomyces punctatus DAOM BR117 28S ribosomal RNA (SPPG_11002), rRNA blastn 6860 198 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
22246567 22246567 PRJNA597223_P_NODE_73558_length_165_cov_8.446154_g71712_i0 PRJNA597223 73558 165 8.446154 13.9361541 uncultured Rhizophydiales 687209 Fungi Fungi 237 3.5500000000000004e-58   NTclustered gi|1666220530|gb|MH643793.1| 687209 g71712 i0 92.683 105.4 164 12 99 0 2 165 6543 6380 Uncultured Rhizophydiales isolate SkChyt5 18S ribosomal RNA gene, partial sequence; putative homing endonuclease gene, complete cds; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 17391 237 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales     uncultured Rhizophydiales
23521253 23521253 PRJNA597223_P_NODE_22039_length_339_cov_7.072368_g20199_i0 PRJNA597223 22039 339 7.072368 23.97532752 Spizellomyces punctatus 109760 Fungi Fungi 195 5.03e-45   NTclustered gi|1027029543|ref|XR_001677161.1| 645134 g20199 i0 100 31.212389380531 105 0 31 0 235 339 4019 3915 Spizellomyces punctatus DAOM BR117 28S ribosomal RNA (SPPG_11002), rRNA blastn 10581 195 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;