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contig_metadata

25 rows where analysis = "blastn", bioproject = "PRJNA597223" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 25 ✖

bioproject 1

  • PRJNA597223 · 25 ✖

analysis 1

  • blastn · 25 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
569359 569359 PRJNA597223_P_NODE_66641_length_176_cov_2.007092_g64795_i0 PRJNA597223 66641 176 2.007092 3.53248192 Didymium spongiosum 289992 Evosea other_Eukaryota 128 2.4e-25   NTclustered gi|2161226356|gb|MZ313554.1| 289992 g64795 i0 93.182 3.24431818181818 88 5 50 1 45 132 6916 7002 Mucilago crustacea 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 571 128 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium spongiosum
1844591 1844591 PRJNA597223_P_NODE_27902_length_290_cov_1.792157_g26056_i0 PRJNA597223 27902 290 1.792157 5.1972553 Thecamoeba quadrilineata 343530 Discosea other_Eukaryota 71.3 7.41e-8   NTclustered gi|2386968834|ref|NC_068853.1| 343530 g26056 i0 89.474 0.196551724137931 57 4 20 2 74 130 9326 9380 Thecamoeba quadrilineata mitochondrion, complete genome blastn 57 71.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba quadrilineata
3120303 3120303 PRJNA597223_P_NODE_57503_length_186_cov_3.344371_g55657_i0 PRJNA597223 57503 186 3.344371 6.22053006 Badhamia foliicola 647245 Evosea other_Eukaryota 335 1.4099999999999996e-87   NTclustered gi|1864351373|gb|MT704208.1| 647245 g55657 i0 99.457 98.9623655913979 184 1 99 0 1 184 230 413 Badhamia foliicola voucher MM21366 small subunit ribosomal RNA gene, partial sequence blastn 18407 335 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Badhamia Badhamia foliicola
5672722 5672722 PRJNA597223_P_NODE_26325_length_301_cov_4.409774_g24480_i0 PRJNA597223 26325 301 4.409774 13.27341974 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 499 8.32e-137   NTclustered gi|2651357777|gb|PP174294.1| 1078836 g24480 i0 96.98 94.8571428571429 298 8 99 1 1 298 3700 3404 Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 28552 499 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
5673091 5673091 PRJNA597223_P_NODE_62745_length_183_cov_2.331081_g60899_i0 PRJNA597223 62745 183 2.331081 4.26587823 Sappinia pedata 472956 Discosea other_Eukaryota 333 4.97e-87   NTclustered gi|157673611|gb|EU004599.1| 472956 g60899 i0 99.454 61.2896174863388 183 1 100 0 1 183 237 419 Sappinia pedata strain UK05-34-3a-M internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 11216 333 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Sappinia Sappinia pedata
5673200 5673200 PRJNA597223_P_NODE_7065_length_655_cov_4.864516_g5623_i0 PRJNA597223 7065 655 4.864516 31.8625798 Korotnevella jeppesenii 1678066 Discosea other_Eukaryota 523 1.1499999999999996e-143   NTclustered gi|861553759|gb|KP719186.1| 1678066 g5623 i0 97.705 48.4167938931298 305 5 46 2 1 304 452 149 Korotnevella jeppesenii strain A4DVDPB clone 4 small subunit ribosomal RNA gene, partial sequence blastn 31713 523 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Korotnevella Korotnevella jeppesenii
5673311 5673311 PRJNA597223_P_NODE_80445_length_157_cov_1.885246_g78599_i0 PRJNA597223 80445 157 1.885246 2.95983622 Cavenderia fasciculata 261658 Evosea other_Eukaryota 76.8 7.69e-10   NTclustered gi|187764061|ref|NC_010653.1| 261658 g78599 i0 86.957 1.22929936305732 69 7 43 2 2 69 10237 10170 Dictyostelium fasciculatum mitochondrion, complete genome blastn 193 76.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
5673377 5673377 PRJNA597223_P_NODE_85465_length_152_cov_1.846154_g83619_i0 PRJNA597223 85465 152 1.846154 2.80615408 Thecamoeba foliovenanda 2653195 Discosea other_Eukaryota 272 8.76e-69   NTclustered gi|2027879228|gb|MW970089.1| 2653195 g83619 i0 100 3.59868421052632 147 0 97 0 6 152 1009 1155 Thecamoeba foliovenanda strain Tfol_RM small subunit ribosomal RNA gene, partial sequence blastn 547 272 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba foliovenanda
8222146 8222146 PRJNA597223_P_NODE_25767_length_306_cov_2.738007_g23923_i0 PRJNA597223 25767 306 2.738007 8.37830142 Hagiwaraea rhizopodium 361088 Evosea other_Eukaryota 329 1.18e-85   NTclustered gi|169930326|gb|EU360787.1| 361088 g23923 i0 87.197 92.4803921568627 289 37 94 0 3 291 163 451 Hagiwaraea rhizopodium isolate Ausk Y-4 elongation factor 1 alpha gene, partial cds blastn 28299 329 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Hagiwaraea Hagiwaraea rhizopodium
9497884 9497884 PRJNA597223_P_NODE_75548_length_163_cov_1.648438_g73702_i0 PRJNA597223 75548 163 1.648438 2.68695394 Physarum viride 289972 Evosea other_Eukaryota 243 7.51e-60   NTclustered gi|1996571749|gb|MW693025.1| 289972 g73702 i0 95.395 83.2760736196319 152 7 93 0 12 163 325 476 Physarum viride voucher MYX7886 small subunit ribosomal RNA gene, partial sequence blastn 13574 243 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum viride
12619854 12619854 PRJNA597223_P_NODE_71430_length_168_cov_3.135338_g69584_i0 PRJNA597223 71430 168 3.135338 5.26736784 Ripella 1217112 Discosea other_Eukaryota 272 9.95e-69   NTclustered gi|1269228373|gb|MF683498.1| 2047821 g69584 i0 95.858 100.910714285714 169 6 100 1 1 168 517 349 Ripella platypodia clone 26.9.30 18S ribosomal RNA gene, partial sequence blastn 16953 274 0.992700729927007 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella platypodia
13323145 13323145 PRJNA597223_P_NODE_51291_length_194_cov_17.811321_g49445_i0 PRJNA597223 51291 194 17.811321 34.55396274 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 322 1.16e-83   NTclustered gi|2651357777|gb|PP174294.1| 1078836 g49445 i0 96.875 38.5618556701031 192 6 99 0 1 192 3260 3069 Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 7481 322 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
13323224 13323224 PRJNA597223_P_NODE_61111_length_186_cov_1.377483_g59265_i0 PRJNA597223 61111 186 1.377483 2.56211838 Schizoplasmodium cavostelioides 661160 Evosea other_Eukaryota 189 1.1599999999999999e-43   NTclustered gi|254679473|gb|FJ544418.1| 661160 g59265 i0 90.411 67.5967741935484 146 10 78 3 40 184 755 897 Schizoplasmodium cavostelioides isolate NZ05-24l-2 18S ribosomal RNA gene, partial sequence blastn 12573 189 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Schizoplasmodiidae Schizoplasmodium Schizoplasmodium cavostelioides
13323467 13323467 PRJNA597223_P_NODE_83251_length_154_cov_1.957983_g81405_i0 PRJNA597223 83251 154 1.957983 3.01529382 Entamoeba gingivalis 38877 Evosea other_Eukaryota 283 4.12e-72   NTclustered gi|2425687081|gb|OQ225449.1| 38877 g81405 i0 100 74.9220779220779 153 0 99 0 1 153 1602 1754 Entamoeba gingivalis isolate ALA_ST3 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 11538 283 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba gingivalis
15169001 15169001 PRJNA597223_P_NODE_83012_length_154_cov_2.806723_g81166_i0 PRJNA597223 83012 154 2.806723 4.32235342 Vannella 95228 Discosea other_Eukaryota 278 1.92e-70   NTclustered gi|399764233|gb|JQ271744.1| 1215648 g81166 i0 99.346 98.4415584415584 153 1 99 0 1 153 1789 1637 Vannella sp. JRF2 18S ribosomal RNA gene, partial sequence blastn 15160 278 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. JRF2
15871915 15871915 PRJNA597223_P_NODE_52013_length_193_cov_2.031646_g50167_i0 PRJNA597223 52013 193 2.031646 3.92107678 Ripella sp. PS2 1217116 Discosea other_Eukaryota 185 1.57e-42   NTclustered gi|399764205|gb|JQ271716.1| 1217116 g50167 i0 84.264 102.60103626943 197 24 100 7 1 193 1176 1369 Ripella sp. PS2 18S ribosomal RNA gene, partial sequence blastn 19802 185 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. PS2
15872319 15872319 PRJNA597223_P_NODE_913_length_1677_cov_355.496955_g557_i0 PRJNA597223 913 1677 355.496955 5961.68393535 Vannella septentrionalis 197531 Discosea other_Eukaryota 261 2.64e-64   NTclustered gi|300078499|gb|GU001161.1| 197531 g557 i0 76.493 18.2671437090042 536 92 31 27 161 687 1785 2295 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 30634 261 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
18420706 18420706 PRJNA597223_P_NODE_11015_length_519_cov_21.216942_g9317_i0 PRJNA597223 11015 519 21.216942 110.11592898 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 643 6.599999999999998e-180   NTclustered gi|2651357777|gb|PP174294.1| 1078836 g9317 i0 89.06 29.5838150289017 521 53 99 3 1 518 3036 2517 Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15354 643 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
18421190 18421190 PRJNA597223_P_NODE_53315_length_190_cov_56.219355_g51469_i0 PRJNA597223 53315 190 56.219355 106.8167745 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 268 1.49e-67   NTclustered gi|2651357777|gb|PP174294.1| 1078836 g51469 i0 97.452 82.0947368421053 157 4 83 0 10 166 1675 1831 Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15598 268 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
19695509 19695509 PRJNA597223_P_NODE_39536_length_228_cov_1.880829_g37690_i0 PRJNA597223 39536 228 1.880829 4.28829012 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 322 1.4e-83   NTclustered gi|2651357777|gb|PP174294.1| 1078836 g37690 i0 92.793 52.2763157894737 222 16 97 0 6 227 2226 2447 Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11919 322 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
20971207 20971207 PRJNA597223_P_NODE_27517_length_292_cov_4.898833_g25671_i0 PRJNA597223 27517 292 4.898833 14.30459236 uncultured Rhizamoeba 1260765 Tubulinea other_Eukaryota 207 5.46e-49   NTclustered gi|511487963|gb|JX898537.1| 1260765 g25671 i0 85.507 10.736301369863 207 20 69 9 1 202 202 1 Uncultured Rhizamoeba clone HCA_D03-34 28S ribosomal RNA gene, partial sequence blastn 3135 207 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae   uncultured Rhizamoeba
21542711 21542711 PRJNA597223_P_NODE_77697_length_160_cov_2.664000_g75851_i0 PRJNA597223 77697 160 2.664 4.2624 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 185 1.2499999999999997e-42   NTclustered gi|407369299|emb|FN562423.1| 688087 g75851 i0 87.805 44.56875 164 13 100 6 1 160 905 745 Amoebozoa sp. Pa24 partial 18S rRNA gene, isolate Pa24 blastn 7131 185 1 Eukaryota Amoebozoa             Amoebozoa sp. Pa24
23521422 23521422 PRJNA597223_P_NODE_4099_length_860_cov_6.333333_g3016_i0 PRJNA597223 4099 860 6.333333 54.4666638 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 1144 0   NTclustered gi|2651357777|gb|PP174294.1| 1078836 g3016 i0 91.176 34.4755813953488 850 63 99 11 11 858 4777 3938 Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 29649 1144 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
24794878 24794878 PRJNA597223_P_NODE_12120_length_491_cov_2.537281_g10387_i0 PRJNA597223 12120 491 2.537281 12.45804971 Korotnevella jeppesenii 1678066 Discosea other_Eukaryota 804 0   NTclustered gi|861553739|gb|KP719185.1| 1678066 g10387 i0 96.327 62.5356415478615 490 17 99 1 1 490 1079 591 Korotnevella jeppesenii strain A1JEPDK small subunit ribosomal RNA gene, partial sequence blastn 30705 804 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Korotnevella Korotnevella jeppesenii
24795056 24795056 PRJNA597223_P_NODE_2960_length_1001_cov_8.927536_g2092_i0 PRJNA597223 2960 1001 8.927536 89.36463536 Amoebozoa sp. SZA19 1089205 Root_unresolved Root_unresolved 1568 0   NTclustered gi|441475832|emb|FN562422.4| 1089205 g2092 i0 94.826 41.9170829170829 1005 44 100 8 1 1001 1016 16 Amoebozoa sp. SZA19 18S rRNA gene, isolate SZA19 blastn 41959 1568 1 Eukaryota Amoebozoa             Amoebozoa sp. SZA19

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;