RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA596870" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA596870 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1843944 1843944 PRJNA596870_P_NODE_24142_length_276_cov_1.137931_g24009_i0 PRJNA596870 24142 276 1.137931 3.14068956 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 93.5 1.5e-14   NTclustered gi|2518995612|ref|XM_057449052.1| 13093 g24009 i0 85.393 0.322463768115942 89 13 32 0 187 275 1334 1246 PREDICTED: Hydractinia symbiolongicarpus guanine nucleotide-binding protein subunit beta-4 (LOC130641997), mRNA blastn 89 93.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
3691923 3691923 PRJNA596870_P_NODE_16643_length_323_cov_1.320000_g16510_i0 PRJNA596870 16643 323 1.32 4.2636 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 291 5.9e-74   NTclustered gi|2519007827|ref|XM_057455710.1| 13093 g16510 i0 83.23 99.5696594427245 322 48 99 6 5 323 960 642 PREDICTED: Hydractinia symbiolongicarpus actin, non-muscle 6.2 (LOC130649433), mRNA blastn 32161 291 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
3691996 3691996 PRJNA596870_P_NODE_31923_length_249_cov_0.875000_g31790_i0 PRJNA596870 31923 249 0.875 2.17875 Metazoa 33208 Cnidaria other_Eukaryota 204 5.879999999999999e-48   NTclustered gi|2257805361|ref|XM_032381931.2| 45351 g31790 i0 88.235 67.8353413654618 170 20 68 0 4 173 307 138 PREDICTED: Nematostella vectensis tubulin alpha-2/alpha-4 chain (LOC116618368), mRNA blastn 16891 206 0.990291262135922 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Edwardsiidae Nematostella Nematostella vectensis
4968636 4968636 PRJNA596870_P_NODE_25864_length_267_cov_1.556701_g25731_i0 PRJNA596870 25864 267 1.556701 4.15639167 Pocillopora 46730 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|1524872234|ref|XM_027187692.1| 46731 g25731 i0 92.5 0.299625468164794 40 2 15 1 77 115 41 80 PREDICTED: Pocillopora damicornis THO complex subunit 4-like (LOC113671482), mRNA blastn 80 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora damicornis
15871401 15871401 PRJNA596870_P_NODE_6273_length_488_cov_2.036145_g6140_i0 PRJNA596870 6273 488 2.036145 9.9363876 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 549 1.3799999999999994e-151   NTclustered gi|2782873191|ref|XM_067061560.1| 252671 g6140 i0 87.164 96.5348360655738 483 62 99 0 6 488 1451 969 PREDICTED: Clytia hemisphaerica tubulin alpha-2/alpha-4 chain (LOC136805028), mRNA blastn 47109 549 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
17145917 17145917 PRJNA596870_P_NODE_1994_length_810_cov_2.413840_g1882_i0 PRJNA596870 1994 810 2.41384 19.552104 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 769 0   NTclustered gi|2782873191|ref|XM_067061560.1| 252671 g1882 i0 85.793 89.341975308642 725 103 90 0 85 809 1466 742 PREDICTED: Clytia hemisphaerica tubulin alpha-2/alpha-4 chain (LOC136805028), mRNA blastn 72367 769 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
22245603 22245603 PRJNA596870_P_NODE_31478_length_249_cov_0.875000_g31345_i0 PRJNA596870 31478 249 0.875 2.17875 Anemonia sulcata 6108 Cnidaria other_Eukaryota 58.4 4.84e-4   NTclustered gi|2917940745|emb|OZ237569.1| 6108 g31345 i0 100 3.91967871485944 31 0 12 0 67 97 296311 296281 Anemonia sulcata genome assembly, chromosome: 15 blastn 976 58.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;