RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA596870" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJNA596870 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5672202 5672202 PRJNA596870_P_NODE_28645_length_252_cov_2.212291_g28512_i0 PRJNA596870 28645 252 2.212291 5.57497332 Zebrafish picornavirus 1 2304617 Viruses Viruses 388 1.5299999999999998e-103   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g28512 i0 94.444 3 252 14 100 0 1 252 1804 2055 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 756 388 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
8221385 8221385 PRJNA596870_P_NODE_16947_length_321_cov_0.931452_g16814_i0 PRJNA596870 16947 321 0.931452 2.98996092 Zebrafish picornavirus 1 2304617 Viruses Viruses 555 1.8799999999999998e-153   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g16814 i0 97.819 3 321 7 100 0 1 321 3851 3531 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 963 555 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
19694492 19694492 PRJNA596870_P_NODE_10996_length_383_cov_1.709677_g10863_i0 PRJNA596870 10996 383 1.709677 6.54806291 Zebrafish picornavirus 1 2304617 Viruses Viruses 652 0   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g10863 i0 97.389 3 383 10 100 0 1 383 7861 7479 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 1149 652 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
20970505 20970505 PRJNA596870_P_NODE_20917_length_292_cov_1.757991_g20784_i0 PRJNA596870 20917 292 1.757991 5.13333372 Polycipiviridae sp. 2496155 Viruses Viruses 52.8 0.027   NTclustered gi|2756421824|gb|PP744841.1| 2496155 g20784 i0 90.244 0.14041095890411 41 3 14 1 246 285 9211 9171 MAG: Polycipiviridae sp. isolate 086_167342 genomic sequence blastn 41 52.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Polycipiviridae   Polycipiviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;