RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA594101" and tax_phylum = "Rhodothermota"

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tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA594101 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13321010 13321010 PRJNA594101_S_NODE_28251_length_320_cov_3.052632_g27949_i0 PRJNA594101 28251 320 3.052632 9.7684224 Rhodothermales bacterium 2306054 Bacteria Bacteria 60.2 1.79e-4   NTclustered gi|2518550857|emb|OX638318.1| 2306054 g27949 i0 94.737 0.11875 38 2 12 0 264 301 1853920 1853883 MAG: Rhodothermales bacterium isolate 55cba9af-49f2-4dbc-822e-66a085d3a702 genome assembly, chromosome: 1 blastn 38 60.2 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
14595998 14595998 PRJNA594101_S_NODE_37232_length_284_cov_1.777251_g36930_i0 PRJNA594101 37232 284 1.777251 5.04739284 Rhodothermus marinus 29549 Bacteria Bacteria 52.8 0.026   NTclustered gi|1778177540|dbj|AP019797.1| 29549 g36930 i0 100 0.0985915492957746 28 0 10 0 247 274 2898913 2898886 Rhodothermus marinus AA3-38 DNA, complete genome blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rhodothermaceae Rhodothermus Rhodothermus marinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;