RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA594101" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA594101 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5670890 5670890 PRJNA594101_S_NODE_41725_length_270_cov_0.832487_g41423_i0 PRJNA594101 41725 270 0.832487 2.2477149 Dugesia japonica 6161 Platyhelminthes Platyhelminthes 209 1.3900000000000001e-49   NTclustered gi|393794122|dbj|AK388719.1| 6161 g41423 i0 80.882 15.9851851851852 272 46 99 5 1 269 667 399 Dugesia japonica cDNA, clone: Dj_aH_000_01290HH.full, full-insert sequence, expressed in adult head blastn 4316 209 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Dugesia Dugesia japonica
12046022 12046022 PRJNA594101_S_NODE_12190_length_472_cov_67.646617_g11888_i0 PRJNA594101 12190 472 67.646617 319.29203224 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 747 0   NTclustered gi|68479954|gb|DQ076149.1| 6182 g11888 i0 96.667 0.953389830508475 450 13 95 2 11 459 460 12 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 450 747 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
13321069 13321069 PRJNA594101_S_NODE_36771_length_286_cov_1.107981_g36469_i0 PRJNA594101 36771 286 1.107981 3.16882566 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 54.7 0.007   NTclustered gi|687787484|emb|LK827537.1| 57078 g36469 i0 96.97 0.409090909090909 33 0 11 1 1 32 528 560 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0061396 blastn 117 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
20969200 20969200 PRJNA594101_S_NODE_21877_length_359_cov_2.877622_g21575_i0 PRJNA594101 21877 359 2.877622 10.33066298 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 442 1.7299999999999993e-119   NTclustered gi|68479954|gb|DQ076149.1| 6182 g21575 i0 88.889 1.00278551532033 360 38 100 2 1 359 40 398 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 360 442 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
23519283 23519283 PRJNA594101_S_NODE_11219_length_491_cov_2.267943_g10918_i0 PRJNA594101 11219 491 2.267943 11.13560013 Schistosoma haematobium 6185 Platyhelminthes Platyhelminthes 54.7 0.013   NTclustered gi|2318774105|ref|XM_051217904.1| 6185 g10918 i0 96.97 0.134419551934827 33 0 7 1 316 347 1782 1814 Schistosoma haematobium YTH domain (ECT11_1), mRNA blastn 66 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;