RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA594101" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA594101 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
566914 566914 PRJNA594101_S_NODE_11061_length_494_cov_3.643705_g10760_i0 PRJNA594101 11061 494 3.643705 17.9999027 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 62.1 8.01e-5   NTclustered gi|294876113|ref|XM_002767512.1| 423536 g10760 i0 97.222 0.0728744939271255 36 1 7 0 23 58 11659 11694 Perkinsus marinus ATCC 50983 ciliary dynein heavy chain, putative, mRNA blastn 36 62.1 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
1842561 1842561 PRJNA594101_S_NODE_26742_length_328_cov_2.325490_g26440_i0 PRJNA594101 26742 328 2.32549 7.6276072 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.009   NTclustered gi|294875641|ref|XM_002767369.1| 423536 g26440 i0 100 0.0884146341463415 29 0 9 0 29 57 1479 1451 Perkinsus marinus ATCC 50983 RNA-binding protein, putative, mRNA blastn 29 54.7 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;