RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA594101" and tax_phylum = "Mycoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA594101 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
567267 567267 PRJNA594101_S_NODE_6801_length_626_cov_2.016275_g6505_i0 PRJNA594101 6801 626 2.016275 12.6218815 Mycoplasmatota bacterium 2231116 Bacteria Bacteria 69.4 6.17e-7   NTclustered gi|2040452726|gb|CP074573.1| 2231116 g6505 i0 88.333 0.579872204472843 60 4 9 3 355 413 1911996 1912053 Tenericutes bacterium strain zrk4 chromosome, complete genome blastn 363 69.4 1 Bacteria   Bacillati Mycoplasmatota         Mycoplasmatota bacterium
7517288 7517288 PRJNA594101_S_NODE_23626_length_347_cov_1.631387_g23324_i0 PRJNA594101 23626 347 1.631387 5.66091289 root 1 Root_unresolved Root_unresolved 52.8 0.033   NTclustered gi|1563789200|emb|LR214962.1| 2115 g23324 i0 100 0.726224783861671 28 0 8 0 205 232 509845 509872 Mycoplasma fermentans strain NCTC10117 genome assembly, chromosome: 8 blastn 252 52.8 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mycoplasmopsis Mycoplasmopsis fermentans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;