RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

27 rows where analysis = "blastn", bioproject = "PRJNA594101" and tax_phylum = "Mollusca"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 27 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA594101 · 27 ✖

analysis 1

  • blastn · 27 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1139422 1139422 PRJNA594101_S_NODE_13861_length_444_cov_3.159030_g13559_i0 PRJNA594101 13861 444 3.15903 14.0260932 Metazoa 33208 Mollusca Mollusca 52.8 0.043   NTclustered gi|2669107515|ref|XM_062732871.1| 36930 g13559 i0 100 0.126126126126126 28 0 6 0 100 127 201 174 PREDICTED: Saccostrea cucullata ctenidin-3-like (LOC134250507), partial mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Saccostrea Saccostrea cuccullata
1842434 1842434 PRJNA594101_S_NODE_10802_length_500_cov_1.264637_g10501_i0 PRJNA594101 10802 500 1.264637 6.323185 Argopecten irradians 31199 Mollusca Mollusca 54.7 0.014   NTclustered gi|2835405061|ref|XM_069277897.1| 31199 g10501 i0 89.13 0.184 46 2 9 2 231 274 5574 5618 PREDICTED: Argopecten irradians rab11 family-interacting protein 2-like (LOC138330336), transcript variant X2, mRNA blastn 92 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Argopecten Argopecten irradians
3118063 3118063 PRJNA594101_S_NODE_35723_length_289_cov_4.560185_g35421_i0 PRJNA594101 35723 289 4.560185 13.17893465 Biomphalaria glabrata 6526 Mollusca Mollusca 200 9.03e-47   NTclustered gi|2502109311|ref|XM_013241081.2| 6526 g35421 i0 88.889 43.2837370242215 162 18 56 0 125 286 302 141 PREDICTED: Biomphalaria glabrata 60S ribosomal protein L27a-like (LOC106079852), mRNA blastn 12509 200 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Biomphalaria Biomphalaria glabrata
3118107 3118107 PRJNA594101_S_NODE_40403_length_274_cov_1.149254_g40101_i0 PRJNA594101 40403 274 1.149254 3.14895596 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.025   NTclustered gi|2912996298|dbj|AP039601.1| 145626 g40101 i0 100 0.102189781021898 28 0 10 0 14 41 55779652 55779625 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 20, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
4394557 4394557 PRJNA594101_S_NODE_23924_length_345_cov_1.908088_g23622_i0 PRJNA594101 23924 345 1.908088 6.5829036 Mytilus californianus 6549 Mollusca Mollusca 147 1.46e-30   NTclustered gi|2334717316|ref|XR_007998830.1| 6549 g23622 i0 76.271 28.9855072463768 295 58 84 10 52 340 767 479 PREDICTED: Mytilus californianus succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial-like (LOC127736155), transcript variant X2, misc_RNA blastn 10000 147 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
4394632 4394632 PRJNA594101_S_NODE_32584_length_301_cov_2.728070_g32282_i0 PRJNA594101 32584 301 2.72807 8.2114907 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.028   NTclustered gi|2912986657|dbj|AP039591.1| 145626 g32282 i0 100 0.0930232558139535 28 0 9 0 66 93 16845900 16845873 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 10, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
5670838 5670838 PRJNA594101_S_NODE_34405_length_294_cov_2.131222_g34103_i0 PRJNA594101 34405 294 2.131222 6.26579268 Patella vulgata 6465 Mollusca Mollusca 261 4.16e-65   NTclustered gi|2506338579|ref|XM_050556681.2| 6465 g34103 i0 86.008 77.8299319727891 243 34 83 0 52 294 1423 1181 PREDICTED: Patella vulgata tubulin beta chain (LOC126827387), mRNA blastn 22882 261 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
6243027 6243027 PRJNA594101_S_NODE_10845_length_499_cov_1.340376_g10544_i0 PRJNA594101 10845 499 1.340376 6.68847624 Metazoa 33208 Mollusca Mollusca 52.8 0.049   NTclustered gi|2427243691|ref|XM_052968051.1| 37653 g10544 i0 100 0.168336673346693 28 0 6 0 297 324 370 343 PREDICTED: Octopus bimaculoides aspartate and glycine-rich protein-like (LOC128247865), partial mRNA blastn 84 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus bimaculoides
8220369 8220369 PRJNA594101_S_NODE_47207_length_254_cov_2.685083_g46905_i0 PRJNA594101 47207 254 2.685083 6.82011082 Biomphalaria glabrata 6526 Mollusca Mollusca 86.1 2.27e-12   NTclustered gi|2502105575|ref|XM_056043367.1| 6526 g46905 i0 80.172 2.03149606299213 116 22 46 1 139 254 1119 1005 PREDICTED: Biomphalaria glabrata procathepsin L-like (LOC106063347), transcript variant X2, mRNA blastn 516 86.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Biomphalaria Biomphalaria glabrata
8792260 8792260 PRJNA594101_S_NODE_3887_length_810_cov_25.911805_g3626_i0 PRJNA594101 3887 810 25.911805 209.8856205 root 1 Root_unresolved Root_unresolved 54.7 0.023   NTclustered gi|676443014|ref|XM_009051735.1| 225164 g3626 i0 96.875 0.116049382716049 32 1 4 0 428 459 395 426 Lottia gigantea hypothetical protein partial mRNA blastn 94 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lottiidae Lottia Lottia gigantea
9495357 9495357 PRJNA594101_S_NODE_1728_length_1147_cov_3.201117_g1565_i0 PRJNA594101 1728 1147 3.201117 36.71681199 Saccostrea cuccullata 36930 Mollusca Mollusca 178 1.85e-39   NTclustered gi|2669061441|ref|XM_062766131.1| 36930 g1565 i0 71.644 8.77506538796861 730 182 62 22 285 1000 891 173 PREDICTED: Saccostrea cucullata isocitrate dehydrogenase [NADP] cytoplasmic-like (LOC134283632), mRNA blastn 10065 178 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Saccostrea Saccostrea cuccullata
9495455 9495455 PRJNA594101_S_NODE_3088_length_901_cov_2.942029_g2856_i0 PRJNA594101 3088 901 2.942029 26.50768129 Ruditapes philippinarum 129788 Mollusca Mollusca 239 6.51e-58   NTclustered gi|2616497740|ref|XM_060703578.1| 129788 g2856 i0 72.624 4.53718091009989 789 192 86 24 57 833 1753 977 PREDICTED: Ruditapes philippinarum elongator complex protein 3 (LOC132719729), mRNA blastn 4088 239 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Ruditapes Ruditapes philippinarum
10068015 10068015 PRJNA594101_S_NODE_168_length_2661_cov_25.835781_g126_i0 PRJNA594101 168 2661 25.835781 687.49013241 root 1 Root_unresolved Root_unresolved 82.4 3.52e-10   NTclustered gi|2572398974|ref|XM_059316817.1| 109671 g126 i0 92.857 0.487034949267193 56 4 2 0 610 665 1653 1708 PREDICTED: Physella acuta cell surface glycoprotein 1-like (LOC131953581), mRNA blastn 1296 82.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta
10771262 10771262 PRJNA594101_S_NODE_22229_length_357_cov_1.355634_g21927_i0 PRJNA594101 22229 357 1.355634 4.83961338 Lottia gigantea 225164 Mollusca Mollusca 52.8 0.034   NTclustered gi|676439280|ref|XM_009050555.1| 225164 g21927 i0 100 0.0784313725490196 28 0 8 0 94 121 474 447 Lottia gigantea hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lottiidae Lottia Lottia gigantea
13320996 13320996 PRJNA594101_S_NODE_2611_length_972_cov_25.766407_g2403_i0 PRJNA594101 2611 972 25.766407 250.44947604 Mizuhopecten yessoensis 6573 Mollusca Mollusca 84.2 3.49e-11   NTclustered gi|1207966370|ref|XM_021518066.1| 6573 g2403 i0 97.917 4.79938271604938 48 1 5 0 381 428 1792 1839 PREDICTED: Mizuhopecten yessoensis 60 kDa heat shock protein, mitochondrial-like (LOC110463455), mRNA blastn 4665 84.2 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis
13321095 13321095 PRJNA594101_S_NODE_391_length_1940_cov_4.210498_g320_i0 PRJNA594101 391 1940 4.210498 81.6836612 Octopus bimaculoides 37653 Mollusca Mollusca 111 3.26e-19   NTclustered gi|2427284672|ref|XM_014922237.2| 37653 g320 i0 78.824 0.432474226804124 170 32 9 3 641 808 3105 2938 PREDICTED: Octopus bimaculoides DNA-directed RNA polymerase II subunit RPB2 (LOC106874492), mRNA blastn 839 111 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus bimaculoides
14595769 14595769 PRJNA594101_S_NODE_10312_length_511_cov_0.910959_g10011_i0 PRJNA594101 10312 511 0.910959 4.65500049 Mytilus californianus 6549 Mollusca Mollusca 167 1.7100000000000002e-36   NTclustered gi|2334725173|ref|XM_052248603.1| 6549 g10011 i0 75.066 3.62035225048924 377 84 73 10 54 426 3798 3428 PREDICTED: Mytilus californianus structural maintenance of chromosomes protein 4-like (LOC127737739), mRNA blastn 1850 167 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
15869607 15869607 PRJNA594101_S_NODE_10673_length_502_cov_3.687646_g10372_i0 PRJNA594101 10673 502 3.687646 18.51198292 Mercenaria mercenaria 6596 Mollusca Mollusca 52.8 0.049   NTclustered gi|2441985363|ref|XM_053517892.1| 6596 g10372 i0 100 0.0557768924302789 28 0 6 0 17 44 2003 2030 PREDICTED: Mercenaria mercenaria uncharacterized LOC123531203 (LOC123531203), transcript variant X2, mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria
15869994 15869994 PRJNA594101_S_NODE_8533_length_560_cov_2.090349_g8233_i0 PRJNA594101 8533 560 2.090349 11.7059544 Octopus bimaculoides 37653 Mollusca Mollusca 56.5 0.004   NTclustered gi|2427247424|ref|XM_052968694.1| 37653 g8233 i0 100 0.321428571428571 30 0 5 0 81 110 4544 4573 PREDICTED: Octopus bimaculoides uncharacterized LOC106882913 (LOC106882913), transcript variant X2, mRNA blastn 180 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus bimaculoides
17144658 17144658 PRJNA594101_S_NODE_24054_length_344_cov_2.402214_g23752_i0 PRJNA594101 24054 344 2.402214 8.26361616 Lottia gigantea 225164 Mollusca Mollusca 333 1.04e-86   NTclustered gi|676453046|ref|XM_009054981.1| 225164 g23752 i0 87.075 68.4796511627907 294 38 85 0 51 344 119 412 Lottia gigantea hypothetical protein mRNA blastn 23557 333 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lottiidae Lottia Lottia gigantea
17144723 17144723 PRJNA594101_S_NODE_32594_length_301_cov_2.464912_g32292_i0 PRJNA594101 32594 301 2.464912 7.41938512 Gigantopelta aegis 1735272 Mollusca Mollusca 52.8 0.028   NTclustered gi|2034332620|ref|XM_041508478.1| 1735272 g32292 i0 100 0.0930232558139535 28 0 9 0 49 76 4437 4410 PREDICTED: Gigantopelta aegis polycystin-1-like (LOC121379826), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neomphalida Peltospiridae Gigantopelta Gigantopelta aegis
17144900 17144900 PRJNA594101_S_NODE_52854_length_246_cov_1.231214_g52552_i0 PRJNA594101 52854 246 1.231214 3.02878644 Bradybaena similaris 145626 Mollusca Mollusca 104 6.05e-18   NTclustered gi|2913001816|dbj|AP039609.1| 145626 g52552 i0 84.112 15.3170731707317 107 17 43 0 137 243 36806896 36807002 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 28, sequence blastn 3768 104 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
18418768 18418768 PRJNA594101_S_NODE_13055_length_456_cov_15.710183_g12753_i0 PRJNA594101 13055 456 15.710183 71.63843448 Bradybaena similaris 145626 Mollusca Mollusca 58.4 0.001   NTclustered gi|2912992646|dbj|AP039597.1| 145626 g12753 i0 94.595 3.57236842105263 37 2 8 0 420 456 48904077 48904113 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 16, sequence blastn 1629 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
20969507 20969507 PRJNA594101_S_NODE_7397_length_600_cov_4.889943_g7100_i0 PRJNA594101 7397 600 4.889943 29.339658 Dreissena polymorpha 45954 Mollusca Mollusca 56.5 0.005   NTclustered gi|2364544054|ref|XM_052375915.1| 45954 g7100 i0 92.5 0.0666666666666667 40 1 7 2 524 562 2144 2182 PREDICTED: Dreissena polymorpha aspartate aminotransferase, mitochondrial-like (LOC127845159), mRNA blastn 40 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
22244318 22244318 PRJNA594101_S_NODE_44598_length_261_cov_3.234043_g44296_i0 PRJNA594101 44598 261 3.234043 8.44085223 Patella vulgata 6465 Mollusca Mollusca 226 1.3299999999999994e-54   NTclustered gi|2296443952|ref|XM_050562746.1| 6465 g44296 i0 82.308 70.4942528735632 260 46 99 0 1 260 52 311 PREDICTED: Patella vulgata tubulin beta chain-like (LOC126832052), mRNA blastn 18399 226 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
23519503 23519503 PRJNA594101_S_NODE_39639_length_276_cov_1.896552_g39337_i0 PRJNA594101 39639 276 1.896552 5.23448352 Crassostrea virginica 6565 Mollusca Mollusca 52.8 0.025   NTclustered gi|1242795639|ref|XM_022482492.1| 6565 g39337 i0 100 0.507246376811594 28 0 10 0 77 104 3663 3690 PREDICTED: Crassostrea virginica transmembrane protein 64-like (LOC111133811), transcript variant X2, mRNA blastn 140 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Crassostrea Crassostrea virginica
23519660 23519660 PRJNA594101_S_NODE_6219_length_654_cov_1.543890_g5929_i0 PRJNA594101 6219 654 1.54389 10.0970406 Pomacea canaliculata 400727 Mollusca Mollusca 67.6 2.32e-6   NTclustered gi|1397726189|ref|XM_025254341.1| 400727 g5929 i0 91.667 0.073394495412844 48 4 7 0 109 156 2967 2920 PREDICTED: Pomacea canaliculata cilia- and flagella-associated protein 57-like (LOC112573752), mRNA blastn 48 67.6 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Architaenioglossa Ampullariidae Pomacea Pomacea canaliculata

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;