RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA594101" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA594101 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
566919 566919 PRJNA594101_S_NODE_12361_length_469_cov_2.229798_g12059_i0 PRJNA594101 12361 469 2.229798 10.45775262 uncultured Ignavibacteriales bacterium 1191687 Bacteria Bacteria 52.8 0.046   NTclustered gi|2874253946|emb|OY970271.1| 1191687 g12059 i0 100 0.0597014925373134 28 0 6 0 191 218 1115747 1115720 MAG: uncultured Ignavibacteriales bacterium isolate MFD02416.bin.c.14 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     uncultured Ignavibacteriales bacterium
3118275 3118275 PRJNA594101_S_NODE_8143_length_573_cov_1.988000_g7843_i0 PRJNA594101 8143 573 1.988 11.39124 uncultured Ignavibacteriales bacterium 1191687 Bacteria Bacteria 62.1 9.39e-5   NTclustered gi|2874253946|emb|OY970271.1| 1191687 g7843 i0 97.222 0.136125654450262 36 1 6 0 158 193 3540838 3540803 MAG: uncultured Ignavibacteriales bacterium isolate MFD02416.bin.c.14 genome assembly, chromosome: 1 blastn 78 62.1 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     uncultured Ignavibacteriales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;