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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA594101" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA594101 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3117994 3117994 PRJNA594101_S_NODE_26803_length_328_cov_1.509804_g26501_i0 PRJNA594101 26803 328 1.509804 4.95215712 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 54.7 0.009   NTclustered gi|2037983567|ref|XR_005969501.1| 7654 g26501 i0 100 0.0884146341463415 29 0 9 0 229 257 4944 4972 PREDICTED: Lytechinus variegatus uncharacterized LOC121411591 (LOC121411591), ncRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
3118210 3118210 PRJNA594101_S_NODE_5323_length_703_cov_2.742857_g5042_i0 PRJNA594101 5323 703 2.742857 19.28228471 Acanthaster planci 133434 Echinodermata other_Eukaryota 54.7 0.02   NTclustered gi|1229155348|ref|XM_022234677.1| 133434 g5042 i0 96.97 0.0938833570412518 33 0 5 1 281 313 2793 2762 PREDICTED: Acanthaster planci probable cation-transporting ATPase 13A3 (LOC110979125), mRNA blastn 66 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
6945180 6945180 PRJNA594101_S_NODE_21806_length_360_cov_1.512195_g21504_i0 PRJNA594101 21806 360 1.512195 5.443902 Asterias rubens 7604 Echinodermata other_Eukaryota 63.9 1.58e-5   NTclustered gi|1834283832|ref|XM_033790891.1| 7604 g21504 i0 89.796 0.272222222222222 49 5 14 0 312 360 1726 1678 PREDICTED: Asterias rubens ubiquitin carboxyl-terminal hydrolase 19-like (LOC117306229), transcript variant X1, mRNA blastn 98 63.9 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
8220102 8220102 PRJNA594101_S_NODE_11187_length_492_cov_1.338902_g10886_i0 PRJNA594101 11187 492 1.338902 6.58739784 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 76.8 2.85e-9   NTclustered gi|1752389142|ref|XM_030997266.1| 7668 g10886 i0 97.727 8.42276422764228 44 1 9 0 225 268 429 386 PREDICTED: Strongylocentrotus purpuratus receptor-type tyrosine-protein phosphatase O-like (LOC105441908), mRNA blastn 4144 76.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
12618528 12618528 PRJNA594101_S_NODE_59470_length_203_cov_5.953846_g59168_i0 PRJNA594101 59470 203 5.953846 12.08630738 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 171 4.68e-38   NTclustered gi|2037976123|ref|XR_005969087.1| 7654 g59168 i0 85.714 45.4630541871921 161 23 79 0 43 203 873 713 PREDICTED: Lytechinus variegatus dynein light chain LC6, flagellar outer arm-like (LOC121408814), transcript variant X2, misc_RNA blastn 9229 172 0.994186046511628 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;