RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA594101" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA594101 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
567165 567165 PRJNA594101_S_NODE_45201_length_260_cov_1.235294_g44899_i0 PRJNA594101 45201 260 1.235294 3.2117644 Anemonia sulcata 6108 Cnidaria other_Eukaryota 54.7 0.007   NTclustered gi|2917940714|emb|OZ237561.1| 6108 g44899 i0 100 0.111538461538462 29 0 11 0 8 36 13260706 13260678 Anemonia sulcata genome assembly, chromosome: 7 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
15869751 15869751 PRJNA594101_S_NODE_30953_length_308_cov_1.668085_g30651_i0 PRJNA594101 30953 308 1.668085 5.1377018 Dendronephthya gigantea 151771 Cnidaria other_Eukaryota 52.8 0.029   NTclustered gi|1603784044|ref|XM_028539526.1| 151771 g30651 i0 100 0.181818181818182 28 0 9 0 93 120 1981 1954 PREDICTED: Dendronephthya gigantea serine/threonine-protein kinase MRCK beta-like (LOC114519400), mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Nephtheidae Dendronephthya Dendronephthya gigantea
15869964 15869964 PRJNA594101_S_NODE_58633_length_231_cov_2.348101_g58331_i0 PRJNA594101 58633 231 2.348101 5.42411331 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 220 5.35e-53   NTclustered gi|2782857601|ref|XM_067058150.1| 252671 g58331 i0 86.207 81.2943722943723 203 28 88 0 17 219 88 290 PREDICTED: Clytia hemisphaerica actin, non-muscle 6.2-like (LOC136801512), mRNA blastn 18779 220 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
17144757 17144757 PRJNA594101_S_NODE_36894_length_285_cov_2.471698_g36592_i0 PRJNA594101 36894 285 2.471698 7.0443393 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 219 2.4499999999999994e-52   NTclustered gi|2782943885|ref|XM_067076883.1| 252671 g36592 i0 81.784 129.480701754386 269 42 93 7 1 266 409 145 PREDICTED: Clytia hemisphaerica ubiquitin-ribosomal protein eL40 fusion protein (LOC136820684), mRNA blastn 36902 219 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
19693578 19693578 PRJNA594101_S_NODE_4596_length_753_cov_3.394118_g4323_i0 PRJNA594101 4596 753 3.394118 25.55770854 Orbicella faveolata 48498 Cnidaria other_Eukaryota 60.2 4.51e-4   NTclustered gi|1176112044|ref|XM_020771380.1| 48498 g4323 i0 94.737 0.127490039840637 38 2 5 0 39 76 3598 3635 PREDICTED: Orbicella faveolata uncharacterized LOC110064336 (LOC110064336), partial mRNA blastn 96 60.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Merulinidae Orbicella Orbicella faveolata
24793128 24793128 PRJNA594101_S_NODE_19400_length_380_cov_1.442997_g19098_i0 PRJNA594101 19400 380 1.442997 5.4833886 Hydra vulgaris 6087 Cnidaria other_Eukaryota 261 5.53e-65   NTclustered gi|2744794010|ref|XM_012698561.3| 6087 g19098 i0 81.994 25.8131578947368 311 52 81 4 72 380 217 525 PREDICTED: Hydra vulgaris small ribosomal subunit protein uS11 (LOC100201565), transcript variant X1, mRNA blastn 9809 261 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;