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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA594101" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA594101 · 9 ✖

analysis 1

  • blastn · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3118049 3118049 PRJNA594101_S_NODE_34263_length_295_cov_1.364865_g33961_i0 PRJNA594101 34263 295 1.364865 4.02635175 Plasmodium reichenowi 5854 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.027   NTclustered gi|1145260410|ref|XM_012908180.2| 5854 g33961 i0 100 0.0949152542372881 28 0 9 0 120 147 602 575 Plasmodium reichenowi leucine-rich repeat protein partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium reichenowi
3690891 3690891 PRJNA594101_S_NODE_45443_length_259_cov_1.655914_g45141_i0 PRJNA594101 45443 259 1.655914 4.28881726 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 69.4 2.34e-7   NTclustered gi|9871|emb|X65738.1| 5833 g45141 i0 83.562 2.18918918918919 73 12 28 0 184 256 6181 6253 P.falciparum gene for ATPase 1 blastn 567 69.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
4394469 4394469 PRJNA594101_S_NODE_13204_length_454_cov_3.454068_g12902_i0 PRJNA594101 13204 454 3.454068 15.68146872 Cryptosporidium parvum 5807 SAR_Eukaryotes SAR_Eukaryotes 71.3 1.22e-7   NTclustered gi|126649240|ref|XM_001388256.1| 353152 g12902 i0 88.136 0.55726872246696 59 7 13 0 359 417 415 473 Cryptosporidium parvum Iowa II RIKEN cDNA 2610011N19 gen (cgd5_4400) partial mRNA blastn 253 71.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
4967533 4967533 PRJNA594101_S_NODE_21244_length_364_cov_2.656357_g20942_i0 PRJNA594101 21244 364 2.656357 9.66913948 root 1 Root_unresolved Root_unresolved 54.7 0.01   NTclustered gi|1624735802|ref|XM_029019559.1| 857276 g20942 i0 100 1.17307692307692 29 0 8 0 28 56 878 850 Cryptosporidium ubiquitum uncharacterized protein (cubi_02548), partial mRNA blastn 427 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium ubiquitum
12618497 12618497 PRJNA594101_S_NODE_19390_length_380_cov_1.573290_g19088_i0 PRJNA594101 19390 380 1.57329 5.978502 root 1 Root_unresolved Root_unresolved 56.5 0.003   NTclustered gi|916430219|ref|XM_013380885.1| 5802 g19088 i0 100 2.26315789473684 30 0 8 0 208 237 1205 1234 Eimeria tenella PRP38 family domain-containing protein, putative (ETH_00008210), partial mRNA blastn 860 56.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
15869630 15869630 PRJNA594101_S_NODE_13433_length_451_cov_1.629630_g13131_i0 PRJNA594101 13433 451 1.62963 7.3496313 Cryptosporidium ryanae 515981 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.044   NTclustered gi|2787723164|ref|XM_067342989.1| 515981 g13131 i0 100 0.0620842572062084 28 0 6 0 352 379 1489 1516 Cryptosporidium ryanae uncharacterized protein (FG386_003681), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium ryanae
18418769 18418769 PRJNA594101_S_NODE_13455_length_451_cov_1.156085_g13153_i0 PRJNA594101 13455 451 1.156085 5.21394335 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.044   NTclustered gi|916501857|ref|XM_013496289.1| 44415 g13153 i0 100 0.0620842572062084 28 0 6 0 386 413 1006 1033 Eimeria mitis uncharacterized protein (EMH_0047490), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
22244267 22244267 PRJNA594101_S_NODE_38538_length_280_cov_1.115942_g38236_i0 PRJNA594101 38538 280 1.115942 3.1246376 Plasmodium brasilianum 5824 SAR_Eukaryotes SAR_Eukaryotes 60.2 1.54e-4   NTclustered gi|2785763772|ref|XM_067216866.1| 5824 g38236 i0 90.909 1.00714285714286 44 4 16 0 119 162 3565 3608 Plasmodium brasilianum uncharacterized protein (MKS88_003745), partial mRNA blastn 282 60.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium brasilianum
22244467 22244467 PRJNA594101_S_NODE_9158_length_542_cov_1.413646_g8858_i0 PRJNA594101 9158 542 1.413646 7.66196132 Plasmodium sp. gorilla clade G2 880535 SAR_Eukaryotes SAR_Eukaryotes 60.2 3.18e-4   NTclustered gi|1620166753|ref|XM_028681291.1| 880535 g8858 i0 94.872 0.0719557195571956 39 1 7 1 230 267 905 943 Plasmodium sp. gorilla clade G2 conserved Plasmodium protein, unknown function (PADL01_0725300), partial mRNA blastn 39 60.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium sp. gorilla clade G2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;