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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA594101" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 8 ✖

bioproject 1

  • PRJNA594101 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3118122 3118122 PRJNA594101_S_NODE_42543_length_267_cov_1.871134_g42241_i0 PRJNA594101 42543 267 1.871134 4.99592778 Hariotina sp. MMOGRB0030F 1867922 Plants Plants 67.6 8.73e-7   NTclustered gi|1090895397|gb|KX131180.1| 1867922 g42241 i0 93.333 0.464419475655431 45 3 19 0 168 212 120293 120249 Hariotina sp. MMOGRB0030F chloroplast, complete genome blastn 124 67.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Hariotina Hariotina sp. MMOGRB0030F
3118222 3118222 PRJNA594101_S_NODE_54983_length_244_cov_0.900585_g54681_i0 PRJNA594101 54983 244 0.900585 2.1974274 Chlamydomonas reinhardtii 3055 Plants Plants 172 1.62e-38   NTclustered gi|2082258287|ref|XM_043067367.1| 3055 g54681 i0 82.741 20.7418032786885 197 30 80 4 44 238 1346 1152 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_11g467616v5), mRNA blastn 5061 172 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
9495308 9495308 PRJNA594101_S_NODE_10848_length_498_cov_16.230588_g10547_i0 PRJNA594101 10848 498 16.230588 80.82832824 Chlorella variabilis 554065 Plants Plants 180 2.14e-40   NTclustered gi|552812172|ref|XM_005843586.1| 554065 g10547 i0 77.852 45.0080321285141 298 60 59 6 80 374 426 132 Chlorella variabilis histone H3.2 precursor (CHLNCDRAFT_139997) mRNA, complete cds blastn 22414 180 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
9495359 9495359 PRJNA594101_S_NODE_17588_length_396_cov_18.501548_g17286_i0 PRJNA594101 17588 396 18.501548 73.26613008 Trebouxia sp. SL0000003 3350044 Plants Plants 54.7 0.011   NTclustered gi|2917929618|emb|OZ234906.1| 3350044 g17286 i0 100 0.0732323232323232 29 0 7 0 162 190 4253123 4253151 Trebouxia sp. SL0000003 genome assembly, chromosome: 1 blastn 29 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
9495666 9495666 PRJNA594101_S_NODE_59128_length_224_cov_22.298013_g58826_i0 PRJNA594101 59128 224 22.298013 49.94754912 Dunaliella sp. KU22 1545437 Plants Plants 217 6.67e-52   NTclustered gi|685431495|gb|KM033846.1| 1545437 g58826 i0 86.432 80.8973214285714 199 26 89 1 16 214 267 70 Dunaliella sp. KU22 alpha-tubulin protein (ATUB) mRNA, partial cds blastn 18121 217 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella sp. KU22
14596088 14596088 PRJNA594101_S_NODE_51532_length_248_cov_0.880000_g51230_i0 PRJNA594101 51532 248 0.88 2.1824 Auxenochlorella protothecoides 3075 Plants Plants 82.4 2.86e-11   NTclustered gi|760450068|ref|XM_011403801.1| 3075 g51230 i0 87.324 1.42338709677419 71 9 29 0 170 240 49 119 Auxenochlorella protothecoides Peptidyl-prolyl cis-trans isomerase CYP18-4 partial mRNA blastn 353 82.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
18418957 18418957 PRJNA594101_S_NODE_36735_length_286_cov_1.305164_g36433_i0 PRJNA594101 36735 286 1.305164 3.73276904 Monoraphidium neglectum 145388 Plants Plants 163 1.17e-35   NTclustered gi|926787363|ref|XM_014046702.1| 145388 g36433 i0 83.333 7.96503496503496 180 26 62 4 29 206 870 693 Monoraphidium neglectum Calreticulin Flags: Precursor mRNA blastn 2278 163 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
22244396 22244396 PRJNA594101_S_NODE_54018_length_245_cov_0.895349_g53716_i0 PRJNA594101 54018 245 0.895349 2.19360505 Chlamydomonas reinhardtii 3055 Plants Plants 226 1.23e-54   NTclustered gi|2082257783|ref|XM_001698358.2| 3055 g53716 i0 83.471 24.8408163265306 242 40 99 0 2 243 1110 1351 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_10g461050v5), mRNA blastn 6086 226 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;