RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA594101" and tax_clade = "Metamonada"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJNA594101 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10771536 10771536 PRJNA594101_S_NODE_5649_length_683_cov_3.291803_g5362_i0 PRJNA594101 5649 683 3.291803 22.48301449 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 56.5 0.005   NTclustered gi|2794864432|ref|XM_067915353.1| 135588 g5362 i0 94.444 0.0527086383601757 36 2 5 0 445 480 546 511 Histomonas meleagridis 26S protease regulatory subunit 6B-like (GO595_002443), partial mRNA blastn 36 56.5 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
15869637 15869637 PRJNA594101_S_NODE_14033_length_441_cov_11.290761_g13731_i0 PRJNA594101 14033 441 11.290761 49.79225601 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 130 1.92e-25   NTclustered gi|2794957249|ref|XM_067872345.1| 2049356 g13731 i0 79.058 1.18140589569161 191 38 43 2 245 434 294 483 Monocercomonoides exilis Centrin (MONOS_2427), mRNA blastn 521 130 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
22244330 22244330 PRJNA594101_S_NODE_46438_length_256_cov_4.311475_g46136_i0 PRJNA594101 46438 256 4.311475 11.037376 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 62.1 3.87e-5   NTclustered gi|2794961471|ref|XM_067880396.1| 2049356 g46136 i0 100 0.24609375 33 0 13 0 196 228 2431 2463 Monocercomonoides exilis putative Choline Transporter-like (CTL) Family Protein (MONOS_9859), partial mRNA blastn 63 62.1 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;