RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA594101" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 4 ✖

bioproject 1

  • PRJNA594101 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
567277 567277 PRJNA594101_S_NODE_8381_length_565_cov_1.506098_g8081_i0 PRJNA594101 8381 565 1.506098 8.5094537 Dolichospermum compactum 136073 Bacteria Bacteria 60.2 3.33e-4   NTclustered gi|1210264827|dbj|AP018316.1| 1973481 g8081 i0 94.872 1.35575221238938 39 1 7 1 437 475 1556213 1556250 Dolichospermum compactum NIES-806 DNA, nearly complete genome blastn 766 60.2 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Aphanizomenonaceae Dolichospermum Dolichospermum compactum
3117960 3117960 PRJNA594101_S_NODE_22503_length_355_cov_1.542553_g22201_i0 PRJNA594101 22503 355 1.542553 5.47606315 Leptodesmis sichuanensis 2906798 Bacteria Bacteria 65.8 4.31e-6   NTclustered gi|2173478203|gb|CP075171.1| 2835870 g22201 i0 93.182 0.123943661971831 44 3 12 0 310 353 2151063 2151106 Leptodesmis sichuanensis A121 chromosome, complete genome blastn 44 65.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Leptolyngbyales Leptolyngbyaceae Leptodesmis Leptodesmis sichuanensis
9495391 9495391 PRJNA594101_S_NODE_21728_length_360_cov_3.672474_g21426_i0 PRJNA594101 21728 360 3.672474 13.2209064 Cyanobacterium sp. HL-69 2054282 Bacteria Bacteria 54.7 0.009   NTclustered gi|1298149266|gb|CP024912.1| 2054282 g21426 i0 96.875 0.0888888888888889 32 1 9 0 78 109 2973362 2973331 Cyanobacterium sp. HL-69 chromosome, complete genome blastn 32 54.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Geminocystaceae Cyanobacterium Cyanobacterium sp. HL-69
24091368 24091368 PRJNA594101_S_NODE_39739_length_276_cov_1.315271_g39437_i0 PRJNA594101 39739 276 1.315271 3.63014796 Prochlorococcus 1218 Bacteria Bacteria 54.7 0.007   NTclustered gi|2895594810|gb|CP138949.1| 1499502 g39437 i0 96.97 0.717391304347826 33 0 12 1 129 160 1910136 1910104 Prochlorococcus sp. MIT 0701 chromosome, complete genome blastn 198 54.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Synechococcales Prochlorococcaceae Prochlorococcus Prochlorococcus sp. MIT 0701

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;